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Information for unigene UN39883
| FASTA Sequence |
| Unigene ID: UN39883 | Length: 925 |
SSR | | GTACTCTTAAAACCATGATCATAAACTCCTTAAGATTTTCAGAAACAAAAAGAAAGAAGAAAAAAATTCAGAATGCAGTAAATCAG
AATCCACAAAGATATAAAATCTGCGTGGATAGTTAAGTCATAAATGCAGAAACAAGACTACTGATCTTTGCTTCTTGAAGAAAAAC
CTCAGGTTCTCTTAGAGATGGCCATCACATTGAAGTTGAGAGTGTCTGGATTCTTATCAATAAACTTCTTCATCACCTTCGTCGCA
TCTTTCAAGAGGGTAGATGGAGAGGAAGCACCATGTGAAATTGGTCCAGCTTTCCTTCCATCGAGTTCATAGAGCTCACCATCTAC
ACACGCTAAACAGATGAAATGTGTGTCCGCGTCGTCTGTAGCCGGTGTTTCACCAGCGGTAACCGCCACAGAATGAGCATCTTCTA
TTTGACTGTCATTCTCAAGAAACCTTGCACGCTCCATCGGCGTCATATTAGCAGTGGATTTGAAGAATTTATCCAAGAAAGATCCC
CCGGAAAGCTTGATTTCAGAGGTAATGTTGCCAATAGCATGGAGAAGACCAATGGTTCCACAAGCATTACCCACAGTTTGTTTCAT
GAAGTAAACCTTATCACTATGCACCTTCTCCTTGATTTCCTTGTCTTGCTCGATCCTCTCTTCTTCACTCTTTTTGGTGATAGGGT
AAAGGAAGAGAACAGCAAGGACAGGCTTTGGAACCATCTCAAGAAGTTCGTCGTCTAATCCAAACACGTCATTGCACTCCGCCGCA
TCTGGTTCAAGCCCAAGCCCCCAAAGAAACTGATTCATAACCTCTGGGTTAGCTTCAAGTGGAAGCCATCTCTTAGCAGAAGAACT
CTCCGTCGCCATCTTCGTGATCGTCTTTCTTTCTTTCTTTCTTTCTTTCTGATTTTGCACAACCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_193484 ubiquitin C-terminal hydrolase 3 [Arabidopsis thaliana] | 1096 | 2e-117 |
| XP_002868057 hypothetical protein ARALYDRAFT_493125 [Arabidopsis lyrata subsp. lyrata] | 1079 | 2e-115 |
| ABD65144 ubiquitin carboxyl-terminal hydrolase, putative [Brassica oleracea] | 1018 | 2e-108 |
| XP_002868056 hypothetical protein ARALYDRAFT_914962 [Arabidopsis lyrata subsp. lyrata] | 1012 | 1e-107 |
| ACU16876 unknown [Glycine max] | 917 | 1e-096 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q2TBG8 Ubiquitin carboxyl-terminal hydrolase isozyme L3 | 580 | 5e-059 |
| P15374 Ubiquitin carboxyl-terminal hydrolase isozyme L3 | 577 | 1e-058 |
| Q9JKB1 Ubiquitin carboxyl-terminal hydrolase isozyme L3 | 573 | 3e-058 |
| Q06AB3 Ubiquitin carboxyl-terminal hydrolase isozyme L3 | 573 | 3e-058 |
| Q91Y78 Ubiquitin carboxyl-terminal hydrolase isozyme L3 | 566 | 2e-057 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8GWE1 Putative carboxyl-terminal proteinase | 1096 | 1e-117 |
| Q2A9A0 Ubiquitin carboxyl-terminal hydrolase, putative | 1018 | 1e-108 |
| C6T574 Putative uncharacterized protein (Fragment) | 917 | 7e-097 |
| C6TJP0 Putative uncharacterized protein | 909 | 6e-096 |
| B9GYN0 Predicted protein | 902 | 4e-095 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G17510.1 UCH3 (UBIQUITIN C-TERMINAL HYDROLASE 3); ubiquitin thiolesterase | 1097 | 5e-120 |
| AT1G65650.1 UCH2; ubiquitin thiolesterase/ ubiquitin-specific protease | 156 | 7e-011 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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