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Information for unigene UN39887

FASTA Sequence
Unigene ID: UN39887Length: 1210 SSR 
CAGACCGGAACTTGTGGGCTGATTAATTTTGCTCTGATAGTCAGTCGACTCAGTCCAAGAAAACAAAATAGTGGCGATATTAAGCA
ACAAATTAAATAGATGACCCATATCAAATGCTTCAAAAGCCCAACCCAAACGCATGTTAATTTTAGCTACTCCGAGAGTTGAGGTA
CCAAATGTATTTGTAGCAGTTCTAGACACATAACAAACTAAAAATGGAAAAGAAAACAAGGTTGAAGAATAAGACCTCCACAGAGA
TGCAAACGGACACTCGCAAATCCACAATTCCAACGACATTTTGTTCTCCGCAAACCATCAAACCGGTGAGTTCAAGTTTGTTTCAA
GTCACTGTTTTCTTTAAGAGACTTCAGTCTTCTGTAGCCCTTATCGGTACCAAAGATCCAGTCCATGTACACAAAAGTTGAGGAGT
AATTTCCAGATTTTGTGTAGAGGAGGCGGTGATGGTAGTCATGGAAGTCAGAACCTCCATATAGAGGAAGAAAATTTGAGAGGCTC
CAAGGGAAATGATAACCACAATGTGCCTCAACTGTCTCAAGCACTCTCAGCACCATCCATAACCAGAGAGTAATTAGGTGGGGGCC
GGTGAGAGCTGGCCCGACTATGGTAGCAAATCCCAGGAACAGAATCTCAGCGGGGTGAGCATATTCCGATGTCAAACCAAATGGTG
TGGCATATTCATGATGAACACTGTGCACGGTCTTGTACAGCCATTTTGTATGCAAGATCCGATGACCCCAATAGAAAACAAAATCC
TCAATGATGAAGTAGAATAATATCTGGGCAGACACTTCTTTCCAGGAGGGTAGAGGAAAACTGCTTCGCATTCCCATGGCTCTGAA
GACAGGATAGGAGGCCATCATCAGAGGCAAGTTTACGCAGAAATGATAAAGCAACAAGCGAGTTATACATTTTTCTTGAGCTGCAG
GTGTGTTATTTTTTGCCTGAATCTTGTACTTGGTGAGAAAGCCTTGCCTTTCTAGATAAATGAAAGGGAGGCCAGATAAGAAGAAG
ACGCTTTCATGGAGGTGAAAACTCCCGATGCAGGCCAGTTGAAAGTCGCTAAAATGTGTCACAAGGTGCTGCCAACCGGATTCGAC
GAGGGACGCCATTGATGGATCTAGAGAGAGAGAGAGATTCGGGGGAAGATGTAGAAGGAAGAAAGAGGTGGGAGAGAGGCCACGAG
TGAAAC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002889647 sterol 4-alpha-methyl-oxidase 2 [Arabidopsis lyrata subsp. lyrata]14045e-153
NP_563789 methylsterol monooxygenase [Arabidopsis thaliana]13831e-150
AAM64821 putative C-4 sterol methyl oxidase [Arabidopsis thaliana]13794e-150
AAF79571 F22G5.23 [Arabidopsis thaliana]13401e-145
XP_002881040 hypothetical protein ARALYDRAFT_481856 [Arabidopsis lyrata subsp. lyrata]13095e-142

Swiss-Prot top hits (Blast detail)Scoree value
Q55D54 Putative C-4 methylsterol oxidase DDB_G02697885905e-060
Q55D52 Putative C-4 methylsterol oxidase DDB_G02709465744e-058
Q15800 C-4 methylsterol oxidase5011e-049
Q5R574 C-4 methylsterol oxidase5011e-049
O35532 C-4 methylsterol oxidase5001e-049

TrEMBL top hits (Blast detail)Scoree value
Q8VWZ8 At1g0742013831e-150
Q8LBE1 Putative C-4 sterol methyl oxidase13793e-150
Q9LNW2 F22G5.2313409e-146
B6REN1 Putative C4-methy sterol oxidase13013e-141
B2BXV6 Putative uncharacterized protein12995e-141

Arabidopsis top hits (Blast detail)Scoree value
AT1G07420.1 SMO2-1 (STEROL 4-ALPHA-METHYL-OXIDASE 2-1); 4-alpha-methyl-delta7-sterol-4alpha-methyl oxidase/ C-4 methylsterol oxidase13844e-153
AT2G29390.2 SMO2-2 (STEROL 4-ALPHA-METHYL-OXIDASE 2-2); 4-alpha-methyl-delta7-sterol-4alpha-methyl oxidase/ C-4 methylsterol oxidase12958e-143
AT2G29390.3 SMO2-2 (STEROL 4-ALPHA-METHYL-OXIDASE 2-2); 4-alpha-methyl-delta7-sterol-4alpha-methyl oxidase/ C-4 methylsterol oxidase12582e-138
AT1G07420.2 SMO2-1 (STEROL 4-ALPHA-METHYL-OXIDASE 2-1); 4-alpha-methyl-delta7-sterol-4alpha-methyl oxidase/ C-4 methylsterol oxidase11211e-122
AT2G29390.1 SMO2-2 (STEROL 4-ALPHA-METHYL-OXIDASE 2-2); 4-alpha-methyl-delta7-sterol-4alpha-methyl oxidase/ C-4 methylsterol oxidase10682e-116

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
101  17%
 
82  33%
 
62  33%
 
111  17%

Unigene MembersMember information