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Information for unigene UN39896

FASTA Sequence
Unigene ID: UN39896Length: 1114 SSR 
GGCTACCATTTTGAGTTTCGAAACTTTACGGCTCCCAACTTGTACATTTACCGCGAGAGAGAGAGAGAAAAGGGAAGAGACAAGCC
AGGATCCGCCATACCTGTACAGATCCCCACCATCCAAAAGTAAACCCTAATCATGCCTCCAGGTGCTAAGAAAAGGAAAGCTGCAA
AGAAAAAGTAGCAACAACAGCAAGAAGCATCTTCTACTCAAACCAATCTCATACCCACCAATCATGATTCGAGCGAAGAAGATTCT
GTCAGAAGTACCGACAAGGACTCTGATGAGCGGATAGAGATCGCTGATTCAAGCCGTGATCATGACAAGAACTCTACCAGCAGCAG
TAGTAGCAGCAGCAGCTCGGATGATGAATCTAGTGAAGTTAAGAAGAAGAAGAAGAAGGAGAGTGGTGAATCTGTCTCTGAATCAA
TCACTGCTAATGTGATCGTAGAGAGTATCGGTTTGATGGATTCAGCTACTCCTAGTGATCCAAACACCGAAAAAGTGATTGAAATC
GCGACTGTTGGTACAGTGGTCTCAGCCGAGAATGAGGAGAGTTCTTTGCCTAAACCAAACGAGATCACTGCTGAGGTTTCTCTTGC
CTCTGATGAGGTTAAGCAGGCGTCTTCAAGTGCAACCACCGCTGTTAAAAAAGAAACTGAGGGAAAAGCTTCGTCTCTTGCTCCTG
AAGTCAGCAAGGAGTCTGACGCTACTACCAGTTCTCATGAAGAAGAGACTATACTCAATATTCTCTCAGGGTTCCGTGGGACCAAC
ACATGGAGTTGCGGAAAGAACCTCATGGTTAAGTTGTTGCGGCTTGTTTGATGTGGTCACAGGATCCAGTAGATAAACTCAGAAAC
AGAGTTTTCTTCATGAACTTAGAAGCTACAGAAGTGCTATCACAGCTAAGGATTCTCGGTTTTCTTATATCAAGGTTACCTGTGAA
AATTCACAAACACACACATTGTCTTACTTCTAGTAGTCTTCAAGGCAGGCTTGTCTGTAGTTTTTCTGCTCTTTTATAAGTCCTTA
CAGGTTCTCTTCCCTTTTGCTCTGTACGATTCCTTGTCTGTTGTCGTTTTTTCTGTTCTCTCAGGTTGTGAGACTGTTGTTG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002870072 predicted protein [Arabidopsis lyrata subsp. lyrata]3086e-026
NP_849405 uncharacterized protein [Arabidopsis thaliana]2763e-022
NP_567549 uncharacterized protein [Arabidopsis thaliana]2763e-022
AAM65758 unknown [Arabidopsis thaliana]2701e-021
CAB53648 putative protein [Arabidopsis thaliana]2692e-021

Swiss-Prot top hits (Blast detail)Scoree value
Q75JC9 Uncharacterized protein DDB_G02716701497e-009

TrEMBL top hits (Blast detail)Scoree value
Q3E9Z7 Putative uncharacterized protein At4g18070.22762e-022
Q8VZS7 AT4G18070 protein2762e-022
Q8L9U4 Putative uncharacterized protein2701e-021
Q9SVW4 Putative uncharacterized protein AT4g180702691e-021
B9DG49 AT4G18070 protein (Fragment)2547e-020

Arabidopsis top hits (Blast detail)Scoree value
AT4G18070.1 unknown protein2761e-024
AT4G18070.2 unknown protein2761e-024
AT4G18070.3 unknown protein2761e-024
AT4G18070.4 unknown protein2761e-024
AT1G29470.1 dehydration-responsive protein-related1254e-007

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
101  33%
 
112  67%

Unigene MembersMember information