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Information for unigene UN39899
| FASTA Sequence |
| Unigene ID: UN39899 | Length: 872 |
SSR | | GCTGAAAAACGCGTTTATTAAAAACGTTTATGACACGATCAAAACGTTTGATTTCAGTTTCAAGAAAAAAAAAGAAAACACGTAAC
AACATTCATAACCAACTCTCTCTCAAAAAAAAAGATGCATTTGAAGACATTATTGTAACTTGTTCTATCAAGATCACATCTTGGCT
TCTCTAGCAGCCATCGCTTCTTCTTCTTCTTGACACTAGCAGACTTGTAACCACCTTTGCACGGCTTCCCCCAAGGGCTAACCGAC
GTCCTACCTCTGCTTCCACTACTTTTGATCTTTCCTTCACCACCACCATGTGGATGATCACACGGATTCATCGCCACACCTCTCAC
TTTGGGTCTTATCCCCAGCCACCTACTCTGTCCTGCTTTATACAGCTTCTTCACTCCATGAGACGGGGTTCGACACTGTACCGATG
GTAGCACGGCACCTGGCGTTGATCCACCTGGTGTCACCTGAAGGGAGCTTGATCAAGCACTTCCCTGAAGCAGGCTCCTTGAGGAT
CTTGGCGTTTGTTCCCGCAGCTCGTACTAGCTTGGCGCCTTGACCAGGGTTCATCTCGATGTTGTGGATGATTGTTCCTATGCGCA
TCATTCCTAGCGGCATGGAACTTCCTATCATTGAGTTGATGTCCATGTGGAGCATCTTTTCTTCCATTTCTGCCACCAGTGTTTTG
TTCTGCACATCACCAAAAGCTGTGGAGAAGCTGCGAAATGCTGGACGCACAAGGCTGTTGAATAAAGAAGAAGAAGAAGAAGAAGA
AGCTCGAGCTCTACATAGCGCCACAAGGGCAGACATGGGAGTTGATTGAGCGAGAGAAAAGTAAAGTTTTTTTTTCTTTTTTGCAC
TCTCTATCTCCA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_566007 ribosomal protein L2-like protein [Arabidopsis thaliana] | 588 | 1e-058 |
| XP_002880081 ribosomal protein L2 family protein [Arabidopsis lyrata subsp. lyrata] | 588 | 1e-058 |
| AAM64400 unknown [Arabidopsis thaliana] | 580 | 1e-057 |
| CAA57902 ribosomal protein L2 [Arabidopsis thaliana] | 431 | 2e-040 |
| AAK95391 ribosomal protein L2 [Gossypium arboreum] | 358 | 6e-032 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P0C8K6 60S ribosomal protein L2, mitochondrial | 265 | 2e-022 |
| Q2F969 60S ribosomal protein L2, mitochondrial | 265 | 2e-022 |
| P92812 60S ribosomal protein L2, mitochondrial | 265 | 2e-022 |
| P26859 60S ribosomal protein L2, mitochondrial | 246 | 3e-020 |
| Q2GL56 50S ribosomal protein L2 | 219 | 4e-017 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8VZU4 Expressed protein | 588 | 9e-059 |
| Q8LCY4 Putative uncharacterized protein | 580 | 8e-058 |
| Q39213 Ribosomal protein L2 | 431 | 1e-040 |
| Q8VZZ6 Ribosomal protein L2 (Fragment) | 358 | 4e-032 |
| B9T6J5 50S ribosomal protein L2, putative | 355 | 9e-032 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G44065.1 ribosomal protein L2 family protein | 597 | 5e-062 |
| AT2G44065.2 ribosomal protein L2 family protein | 597 | 5e-062 |
| ATCG00830.1 encodes a chloroplast ribosomal protein L2, a constituent of the large subunit of the ribosomal complex | 163 | 1e-011 |
| ATCG01310.1 encodes a chloroplast ribosomal protein L2, a constituent of the large subunit of the ribosomal complex | 163 | 1e-011 |
| AT3G51190.1 structural constituent of ribosome | 133 | 3e-008 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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