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Information for unigene UN39912

FASTA Sequence
Unigene ID: UN39912Length: 1109 SSR 
GGATTGCAAAATGACTCATCTTCTTCTTCTTCTTCTTCATCTAGAGAGAATCTAGGGTTCCAGATTTACTCTTCATCTTCACCTTC
ATCTTCTTCTATCTACACATCCCTAGATCTTCACAACCCATCAATCTCTATACATTTGCAAGGTACAGAGACAAAAAAAACCCACC
TTTATTCCAGCTTAGCACTAACCCTAGCTTCCATGGCGAAAACGCGACCAGGTGTGCCCTCAAAGATCAAAACAGGGAGGAAGGAG
CTCGACATGTATACCATCAAAGGCACCAACAAAGTTGTGAGAGCTGGAGACTATGTGTTGATGCGTCCGTCGGATGCTGGTAAGCC
ACCATACGTGGCACGTGTTGAGAAGATTGAAGCGGATGCTAGGAACAATGTGAAGGTGCGCTGTCGGTGGTATTACCGCCCTGAGG
AGTCTCTTGGTGGTAGGAGACAGTTCCATGGAGCCAAAGAGCTTTTCTTGTCTGACCATTTTGATGTTCAAAGCGCACACACCATT
GAGGGAAAATGCATTGTTCACACCTTCAAGAGCTACACTAGGCTTGAGAACGTTGGAGCAGAGGATTATTATTGTAGGTTCGAGTA
CAAGGCTGCTACTGGCGCGTTTACCCCTGACCGTGTTGCTGTGTACTGTAAATGTGAGATGCCTTATAATCCAGACGATCTCATGG
TGCAATGTGAAGGCTGCAAAGACTGGTATCATCCTGCATGTGTTGGCATGACGATTGAAGAAGCAAAGCTGCTTGATCACTTCGCA
TGTGCTGAATGCAGTTCTGATGACGATGTCAAGAAATCACAGAATGGGTTTACTGCATCTCCAGCTGATGATGTCAAGGTGGAACC
AAAGCGCAGGAAAAGATAATCGCGAGGTTCTCAGGGGGTGAAAGCCACAAGGGATGGGCAAGTTATAAACTTGGAAGCTCTCTTTT
GTGCATATTTTTAGCTAAGTTAGAATTTTATGTATGGTGTCTGTATGGTGCGTTCCGGAAAACTAAGACAAATGGGAAAAAGGAGA
GAAATGATGAAGACAGGTTATGGTGGCTGAGTCAGTTGTATAGACTTTTTCCGTGGCATTTAAGTTAACTTTAGGTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_001031695 PHD finger and bromo-adjacent homology domain-containing protein [Arabidopsis thaliana]11698e-126
NP_193945 PHD finger and bromo-adjacent homology domain-containing protein [Arabidopsis thaliana]11402e-122
XP_002867787 DNA binding protein [Arabidopsis lyrata subsp. lyrata]11349e-122
XP_002317150 ebs-bah-phd domain-containing protein [Populus trichocarpa]10344e-110
XP_002518423 phd finger transcription factor, putative [Ricinus communis]10335e-110

Swiss-Prot top hits (Blast detail)Scoree value
O75151 PHD finger protein 21561e-009
Q9WTU0 PHD finger protein 21561e-009
Q3UWM4 Lysine-specific demethylase 71407e-008
Q6ZMT4 Lysine-specific demethylase 71362e-007
Q08D35 Lysine-specific demethylase 71318e-007

TrEMBL top hits (Blast detail)Scoree value
Q56W44 Receptor like protein11696e-126
B9HZB2 Ebs-bah-phd domain-containing protein10342e-110
B9RXF4 Phd finger transcription factor, putative10333e-110
B9N8F2 Ebs-bah-phd domain-containing protein10324e-110
C6T7C3 Putative uncharacterized protein10218e-109

Arabidopsis top hits (Blast detail)Scoree value
AT4G22140.2 DNA binding / protein binding / zinc ion binding11702e-128
AT4G22140.1 DNA binding / protein binding / zinc ion binding11407e-125
AT4G04260.1 bromo-adjacent homology (BAH) domain-containing protein7421e-078
AT4G39100.1 SHL1 (short life); transcription factor/ zinc-mediated transcriptional activator7259e-077
AT4G11560.1 bromo-adjacent homology (BAH) domain-containing protein1263e-007

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
122  67%
 
211  33%

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