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Information for unigene UN39925

FASTA Sequence
Unigene ID: UN39925Length: 885  SNP
GTCAATATAAATCTCTCAATATAGGTTAATAAAGTTGCCAGGAGAAAATAAAGTTTTAAATAACGCAGTAACGGGCAAAATGTCAT
TTGGTCAAACACACAAACCATGTTTTGGAGAGAAATGAATGGAACTTACTATTTCCTTCCTTTACTTCTTAGGGATAGGCTCCAAG
TTCATCCCTTGAAGGTTAAGCAGCAAATCATTGGAGCTTAGGTAGACCTTGTTAGCTGATTGTGCAATGGTCTGAGCAATCTCTCT
CGCAGCTTCAATCTTTCTCAGTGTTATGAATGCCTGATTGTTTGCAATGGCTTGTCCGATAAGTTGAGCACTTTTAGCTTCTCCCT
CTGCACGGATAACCGCACTCCTCTTGTCTTGCTCGGCTTTCTCCACAATGAACTTAGCCCGTTCAGCTTCCTGCGCAGCGACTTGC
TTTGCCTCGATTGCAGCGGTGAACTCTTTGCCGAACGTGAGGGTCGTGATGGAGACATCATCAAGAGCAATGTCGAAGTTAGAAGC
TCTCTCCGTCAGAATCTTGCGTATCTCTCTGCTCACAGCTTCTCTCTGAGTGATCAGCTGGCTTGCATTGTACTGAGCCACCACAG
CCTTGAGGGTTTCATGGATGATGGAAGGAAGAACCCTTTCACTGTAATTCTCGCCTAGGGTTCGGTAAATCTGAGGCAAACGGTCA
CCCATGGGACGAGTGAGAACTCTAAGTCCAATTTTCACCATCTGAAGGTCATGACTACCGGTGGTGCTCTCAACAAGATAGGGTCG
TGCACGGGCGTCATAGATGATTGGCCTCTCAAACCATGGCAACATAAAATGTGTTCCTTCCGGGTACACCTTTTCCTTGATACCAG
TTAAACGGTGACATGACAGCACGGT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002892184 ATPHB2 [Arabidopsis lyrata subsp. lyrata]11401e-122
NP_171882 prohibitin 2 [Arabidopsis thaliana]11373e-122
AAK07610 prohibitin 1-like protein [Brassica napus]10801e-115
NP_194580 prohibitin 1 [Arabidopsis thaliana]10648e-114
AAM65593 prohibitin-like protein [Arabidopsis thaliana]10648e-114

Swiss-Prot top hits (Blast detail)Scoree value
Q54Q31 Prohibitin-27283e-076
P50093 Mitochondrial prohibitin complex protein 26844e-071
Q99623 Prohibitin-26827e-071
O35129 Prohibitin-26827e-071
Q5XIH7 Prohibitin-26827e-071

TrEMBL top hits (Blast detail)Scoree value
Q9ZNT7 Prohibitin 211372e-122
Q9AXM0 Prohibitin 1-like protein10808e-116
O49460 Prohibitin 110646e-114
Q8LA39 Prohibitin-like protein10646e-114
Q9SIL6 Putative prohibitin10502e-112

Arabidopsis top hits (Blast detail)Scoree value
AT1G03860.1 ATPHB2 (PROHIBITIN 2)11371e-124
AT1G03860.3 ATPHB2 (PROHIBITIN 2)11371e-124
AT4G28510.1 ATPHB1 (PROHIBITIN 1)10643e-116
AT2G20530.1 ATPHB6 (PROHIBITIN 6)10511e-114
AT2G20530.2 ATPHB6 (PROHIBITIN 6)10511e-114

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
72  33%
 
92  33%
 
62  33%

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