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Information for unigene UN39940

FASTA Sequence
Unigene ID: UN39940Length: 755 SSR 
TGAAATTTCTCATTGAATGAAGAAAGTCTCGATACTGCAGAAGATTTGGATGAGCATGCTAATGACGAGGAAGATGCAGAGGGAAT
AGATTTACAGCAGCAGCAGCAGCAACGTTACCCCTGGGAGGGGAGTGATAGGGATTACATATACGACGAGCTTCTTGGCAGAGTCT
TTAACATTCTCCGTGAAAACAATCCGGAACTTGCTGGAGATAGACGTCGTACGGTTATGAGGCCTCCTCAAGTTCTTCGTGAGGGA
ACGAAGAAGACTGTGTTTGTCAACTTTATGGATCTTTGCAAGACGATGCATCGTCAGCCGGATCATGTAATGAATTTCTTGCTTGC
TGAGTTGGGTACGAGTGGTTCGCTTGACGGGCAGCAACGATTGGTTGTCAAGGGGAGATTCGCACCCAAGAATTTCGAAGGGATAC
TGCGGCGTTACGTCACTGAGTACGTCATTTGCCTTGGTTGCAAGAGTCCGGACACAATTCTCTCAAAGGAGAATCGTCTCTTCTTT
TTCAGATGCGAAAAGTGTGGATCTGGACGATCTGTGGCGCATGTCAAAGCTGGTTTTGTTGCTCGTGTTGGTCGCAGGAAGACTTG
AGAAATTGGTGGGTGAAGTGAACACTAAAGAGCTTGTTATGGAGTTGAGAAACTTGTTTTTTTTCTTTCGTTTTTTTTAAAGAATA
TGAGGTGTAATCTACTTTGTTCTCCATACTATGTCTTGAAAAAAAATCAAATATGGGATAGGTTTTG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_197592 translation initiation factor eIF-2 beta subunit [Arabidopsis thaliana]8872e-093
AAK29672 protein synthesis initiation factor eIF2 beta [Arabidopsis thaliana]8872e-093
NP_974817 translation initiation factor eIF-2 beta subunit [Arabidopsis thaliana]8872e-093
XP_002874023 protein synthesis initiation factor eIF2 beta [Arabidopsis lyrata subsp. lyrata]8872e-093
XP_002265847 PREDICTED: hypothetical protein [Vitis vinifera]8739e-092

Swiss-Prot top hits (Blast detail)Scoree value
Q41969 Eukaryotic translation initiation factor 2 subunit beta8871e-094
P55871 Eukaryotic translation initiation factor 2 subunit beta8385e-089
O24473 Eukaryotic translation initiation factor 2 subunit beta8072e-085
Q5E9D0 Eukaryotic translation initiation factor 2 subunit 25616e-057
P41375 Eukaryotic translation initiation factor 2 subunit 25616e-057

TrEMBL top hits (Blast detail)Scoree value
Q3E987 Putative uncharacterized protein At5g20920.28871e-093
C6TAV3 Putative uncharacterized protein8701e-091
A9PI50 Putative uncharacterized protein8664e-091
B9I766 Predicted protein8664e-091
C6TP03 Putative uncharacterized protein8583e-090

Arabidopsis top hits (Blast detail)Scoree value
AT5G20920.1 EIF2 BETA; translation initiation factor8887e-096
AT5G20920.2 EIF2 BETA; translation initiation factor8887e-096
AT5G20920.3 EIF2 BETA; translation initiation factor8887e-096
AT3G07920.1 translation initiation factor5088e-052
AT5G01940.1 eukaryotic translation initiation factor 2B family protein / eIF-2B family protein3662e-035

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
91  50%
 
101  50%

Unigene MembersMember information