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Information for unigene UN39971

FASTA Sequence
Unigene ID: UN39971Length: 948 SSR 
GGACGAACGCACTCATCCATAAAGGCAACGGCGGAGACGAGGAGGCTGGGAACACCGACGGGGCAAAAGGTCATTTCTGATATCTT
TTGGAGATCAAATCTCTCTCTCTCTCTCTCTCTCTGTTTAGATGGCATACATATCGAATTGGGTCAGGTACATGGCTCACAAGCTG
GAGTACTCCCTCACTCTCAGCCTCAAGAATCATACTAAAGAGAAGCTAAATGACCGGGAACTAGTTGGTGTAGTCCTGAAGAATTT
ACTCTATGGAAGGATAACCTACTTACACTCTGGTAAAGGTCAAGAGATGTCACCAACCATGGGAGCACATGACAACACACTGCTTG
TCCGTAAGCTACCTGTTGTTGATACAAGGTATGTTTTTGTTGGAGATGCTGTTGTGTTGAAGGACCCGAATGAAACAAACAAGTAT
CTAGTGAGAAGACTAGCAGCGTTAGAAGGATCAGAAATGGTATCAAGTGATGAGAAGGAGGAGCCTTTTGTTCTCGAAAAGGATCA
GTGCTGGGTCGTAGCTGAAAACCAAGAGATGAAATCTAAGGAAGCATACGATAGCCGAACATTTGGTCCGGTCTCAATGGCGGACA
TAGTAGGAAGAGCTATATATTGTCTGAGGACAGCCGTTGATCATGGTCCAGTTAGTAACAGTGAATTCGCAATGGAAGAGGATTCT
CCACTCTTGGCGGTTGAACTTGACGTGGATGAAATGGCTAAAGACCACAAGGCTTAGTAATAACAAAGGAACCTTGTTGCATTGCA
TTTTTTATCCCCTTTGTTTCCGTTGGTTCGAAACTCCAATCTAGATGCCATTTGAGTGTCAGAGATGTTTGTGGCGAATGTTTGGC
CGTAGCTTTCTAAGCTTTCATACAGTTCCTTGTTGAGAGTGCTGAAGAAAGCTTCATCAGCTTCTTCCTCCATAATTAAACACACA
TT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002892327 serine-type peptidase [Arabidopsis lyrata subsp. lyrata]9545e-101
NP_172110 peptidase-S24/S26 domain-containing protein [Arabidopsis thaliana]9492e-100
XP_002879307 serine-type peptidase [Arabidopsis lyrata subsp. lyrata]8613e-090
NP_180672 peptidase-S24/S26 domain-containing protein [Arabidopsis thaliana]8579e-090
AAF80217 Contains similarity to an unknown protein T16B12.5 gi|3746062 from Arabidopsis thaliana gb|AC005311. EST gb|AI996597 comes from this gene8165e-085

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q8W476 Putative uncharacterized protein At1g062009491e-100
Q84VZ6 At2g311408577e-090
Q9LNC7 F9P14.6 protein8164e-085
O82270 Putative uncharacterized protein At2g311407563e-078
B9GS09 Predicted protein6929e-071

Arabidopsis top hits (Blast detail)Scoree value
AT1G06200.1 serine-type peptidase9498e-103
AT2G31140.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Peptidase S24, S26A and S26B, C-terminal (InterPro:IPR011056), Peptidase S24, S26A, S26B and S26C (InterPro:IPR015927), Peptidase S26A (InterPro:IPR014037); BEST Arabidopsis thaliana protein match is: serine-type peptidase (TAIR:AT1G06200.1); Has 126 Blast hits to 126 proteins in 37 species: Archae - 0; Bacteria - 8; Metazoa - 16; Fungi - 28; Plants - 68; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).8583e-092

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
63  100%

Unigene MembersMember information