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Information for unigene UN39989
FASTA Sequence |
Unigene ID: UN39989 | Length: 899 |
SSR | | GGTTTAAGGGGGTGGACATGTAATAACTCATAAGCCTAATAAAATCCATTACAGATGCGTACTTTTGTTCATGCAAAAATATAAGG
AACTAGGGTTTATATTTTATTTAAGCCCTGCTGCGCTTTGTCTAATTCTCCGGAGCTTGATGACCCATGGATGATGGTGGTTGATT
TTGATTCCAGTTCTGTTGTGTTGGCTCTCTCCTCTCCACCTGCATAGTCTCACGGCGCCTATCGTACCGAGGCCTAAACCGGTTTC
TGGTCTGGCGCTGGTCAGTGAACCTGTACTGTGGTCTGGGTATCACCTTTCCTTCAATGTACAAGTCACCTCCATAGTCTTTGTTG
GGTACATCAAGATAAGAATCTGGTAGGACCCAAAGAACACCAGGCAATCCTTTGACTTTGCAAGAGAGTTCTTCAGAGATCAAAGC
ACCAAAGCCAGTGTAAGTCGAAGTGGAAACAGAGTAAATCTTCTTCTTAGCCTCCTCCTCGCTTCCGACAACGGAAGTTAAGGTTT
TGACATAAGCATTGATCATCTCGTCTTCTGTAGGTTTGGGATCATCGAACTCCATGACGATGAGCCAGTGCTCGTAATCGCACCCA
TCGAGAAGAATCGTCTCCTTCGGCGGGCGGTTGCTCCAGTTCGGCGACGGATCGTTCAGCGGAGAGTATCCTGACCCGGATGTCTT
GGGTCGGGTCGTTATGTAGCACGGGCCCAGTCCGGTTCTGGTCGAGGAAACCTTGTCGATTAGATGCACAGCGAATCGTGAACGAG
AAGAGAGCGTAGAAAACGACGACGACGACGACGACGAAGAAGAGAGTGTTCTGGTTATGACCGTCGCTAATTTGCGCCGCGTGGTG
AAAAGAGCCATCGCCAGTGAGGGTTTTGGTCTTGTGCCC
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GenBank top hits (Blast detail) | Score | e value |
NP_974243 putative protein DAG [Arabidopsis thaliana] | 1046 | 1e-111 |
NP_187335 putative protein DAG [Arabidopsis thaliana] | 1041 | 4e-111 |
XP_002884610 hypothetical protein ARALYDRAFT_477997 [Arabidopsis lyrata subsp. lyrata] | 1035 | 2e-110 |
XP_002272388 PREDICTED: hypothetical protein [Vitis vinifera] | 871 | 2e-091 |
XP_002516969 DAG protein, chloroplast precursor, putative [Ricinus communis] | 838 | 1e-087 |
Swiss-Prot top hits (Blast detail) | Score | e value |
Q9LKA5 Uncharacterized protein At3g15000, mitochondrial | 507 | 1e-050 |
Q38732 DAG protein, chloroplastic | 434 | 4e-042 |
TrEMBL top hits (Blast detail) | Score | e value |
Q84JZ6 Putative DAG protein | 1046 | 7e-112 |
Q9M7Y5 DAG protein, putative | 1041 | 3e-111 |
A5AMS0 Putative uncharacterized protein | 871 | 1e-091 |
B9RTA0 DAG protein, chloroplast, putative | 838 | 1e-087 |
B9HXF5 Predicted protein | 819 | 2e-085 |
Arabidopsis top hits (Blast detail) | Score | e value |
AT3G06790.2 plastid developmental protein DAG, putative | 1046 | 4e-114 |
AT3G06790.1 plastid developmental protein DAG, putative | 1041 | 2e-113 |
AT3G15000.1 LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: plastid developmental protein DAG, putative (TAIR:AT3G06790.2); Has 50779 Blast hits to 24732 proteins in 941 species: Archae - 10; Bacteria - 4862; Metazoa - 25623; Fungi - 7071; Plants - 6957; Viruses - 900; Other Eukaryotes - 5356 (source: NCBI BLink). | 507 | 1e-051 |
AT1G11430.1 plastid developmental protein DAG, putative | 423 | 7e-042 |
AT2G35240.1 plastid developmental protein DAG, putative | 413 | 1e-040 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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