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Information for unigene UN40006
| FASTA Sequence |
| Unigene ID: UN40006 | Length: 1085 |
SSR | | GGAGAATTAAAAAGAATAGGGTTAAGCTTCTTTAGCATCTCAACGCTGTTCATGCACCACACACATATATCCAATCAATCAACCAC
TGATAGTACAAGATATTGTCTACTCAAAAGTTTGTGAAACAGCTTTTGTAAACAAGACTAGCTTATAAGAGAACCCAAATAGATTC
AGCAGCAGCAGCAGTAGCAGCAGCAGCAGGAGTTCATAAGAAGAAAACTACATCCAAAAGTGTGATCTAAATTAAGCAGCAGCAGC
TTCCAGAAGCTCTTGATCGAAATGCCATGTTCCATGCCCTTTGCCGAGTCTTCTGAGCTGAGCCACATATTCAGAGATTTTCTTAA
TCGCTTCAACCTGTTCGTTCAAAAACTCGCTCTCAGTGAAATCTGCCAGCTGTACATCATCGTTCTTCGAAGCCACACTGTGCACG
TTGAGGAGCTTTTCATTGAGCAGCTTCTCCAACGATAGAGCCAGTTCCATTGCATAGAGAGCATCTCCTTTCTCGGCGTGACCAAA
CTCAGACTGAGGCATCACCATGGGCTGTAACTTAACCCTTCCACCACGCTTGTTCTGATACTCCATCAACATCTCAGCATGGTCAC
GTTCTTCCACACTCGAGTCCTTGAAAAACTTGGAAAGACCTTTGAGAGCAACGTTATCACGATCAAAGTAAGCGTACAAGGCGTGA
TACACATAAGACACGTTGTACTCCACATCGATCTGCTCATTCACGGCGGCTTCGCACTCGGGAGAGTACAGATGGCGAGCGAGCGA
GAGCTGTGGACTCGAAGGGACGAGATCGAGCTCTTTCTTCACCTCCTCAAACGGCTCGAAAACGACACCTCTTAGGGTTTGCGTAG
AGGCAGAAACAGAGAAGGAGAGGTTTCGTGATTTTCCCGAGGTAACAGGAAGAAGACTCAATGAGGATGAGGAGGAGGAGAAGAGA
GGAGAGATGTCCTTCTTGGCTCCATGGATGTTCACGAGGGAGAAAGCAGAAGCTGATTTGAGAAGCATTTTTGTGTGTATGAATCT
CTCTCTCTCTCTCTGCTGCGAAATGGGAGGAGGAAAGGGTTTGTCTGTCGCCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_001146869 ferritin-1 [Zea mays] | 1191 | 2e-128 |
| BAJ34006 unnamed protein product [Thellungiella halophila] | 1146 | 4e-123 |
| ABB22752 ferritin [Chorispora bungeana] | 1109 | 7e-119 |
| NP_191168 ferritin 3 [Arabidopsis thaliana] | 1100 | 8e-118 |
| XP_002878066 ATFER3 [Arabidopsis lyrata subsp. lyrata] | 1066 | 7e-114 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LYN2 Ferritin-3, chloroplastic | 1100 | 3e-119 |
| Q9S756 Ferritin-4, chloroplastic | 963 | 3e-103 |
| Q8H1T3 Ferritin-2, chloroplastic | 888 | 1e-094 |
| Q948P6 Ferritin-3, chloroplastic | 879 | 1e-093 |
| Q9SRL5 Ferritin-2, chloroplastic | 826 | 2e-087 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G56090.1 ATFER3 (ferritin 3); binding / ferric iron binding / oxidoreductase/ transition metal ion binding | 1100 | 3e-120 |
| AT2G40300.1 ATFER4 (ferritin 4); binding / ferric iron binding / oxidoreductase/ transition metal ion binding | 963 | 2e-104 |
| AT3G11050.1 ATFER2 (ferritin 2); binding / ferric iron binding / oxidoreductase/ transition metal ion binding | 826 | 2e-088 |
| AT5G01600.1 ATFER1; ferric iron binding / iron ion binding | 755 | 3e-080 |
| AT3G61010.1 glycosyl hydrolase family protein 85 | 199 | 9e-016 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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