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Information for unigene UN40009
| FASTA Sequence |
| Unigene ID: UN40009 | Length: 1104 |
SSR | | GGATTTCTTTGAACTTTTCTTACTTGCAGATTTGTTAATTAACTAAGAACAAAGATTGTCTAAAAGATTACAGCTTTGCTGATAAT
ATTCATTACATAGGCTCTCAAAAGGATGATACATGGTTTACCAATTCTATTAGGAACAGTCTGTTCATGCAATGCAAGTCCCCATC
GCCTCATTGTAGTTTCAGAGCTTGACTTCCACATCAACACCAGCAGGAAGATCCAGCTGCATCAAGGAGTCGATGGTCTGAGCAGT
CGGGTAGAGAATATCAATCATCCGCTGGGGGGTCCTGATCTCGAAATGGAACCTTGCATCCTTGTGGACGTGGGGGGACTTGAGAA
CACAGTAAATACGCTTCTTGGTTGGCAAGGGAACAGGACCCATCGTCTTGGCATTGGTGTTCCTCGCAGTGTCGAGTATCTGCTTG
CATGAGTCCTCAATGAGAGGCACCCAGTATGACCTAAGCTTGATCCTAATCTTTTGCTTTGGCGCCATCTTCTTACAAAAATAAAA
CAAACTTCAAAAACATCTCTGGTGTTGTAAAAAAAAAACAGGATTCCAATCTGAACATGATAGTGGTCTGAAAACTATCTACTTAA
TGTCATTTCTTACTACAGAGAAGACAGTTCCGAGCAATGTAAGAACCAAAAAGACACCAACTTTGAGAAATCTGCATAGAACATTC
TAGTAGTGAGCTGGAAGATATACCTTATCTGCGTCTACACTTATTGAGGAAGAGCTTGGAACCTCGGAGAAGTCCTCAGAGGCGGG
TTCTTCGAGGGTTTCTGGAGTTAGGGTCTCGGGAGCTGCGAAGACCTTCTTCGTAAACGAGATGGAGGGTTTGTTAAGGACGCAGG
AGCCAATGCCGCCATGAGTAGAAGAAGATGGAAGCAGAGAGACTTTCTGTTTGGTAGAAGAAGAAGAAGATGAAAGGTTGGCGAAA
GAGGGTAATATGAAGGAAGTTACAGAAGAAACCGCCATTGAATTTCCAGATAAAGAATCGATTTATCTTCTTCTTCTTCCTCCTCT
TAAACGCTTCACAAGGATGTGGTTTTCTCTTCCGCAGCTTCGTCGTTCCGAGGGTTATCCGTTATCCAATCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_187919 30S ribosomal protein S10 [Arabidopsis thaliana] | 530 | 1e-051 |
| ABB97026 unknown [Brassica rapa] | 530 | 1e-051 |
| ABL97980 30S ribosomal protein S10-like [Brassica rapa] | 530 | 1e-051 |
| XP_002884945 hypothetical protein ARALYDRAFT_478688 [Arabidopsis lyrata subsp. lyrata] | 530 | 1e-051 |
| AAW22623 30S ribosomal protein S10-like [Brassica napus] | 525 | 4e-051 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LK61 30S ribosomal protein S10, chloroplastic | 530 | 4e-053 |
| Q9M4Y3 30S ribosomal protein S10, chloroplastic | 511 | 7e-051 |
| B7K833 30S ribosomal protein S10 | 343 | 2e-031 |
| P51286 30S ribosomal protein S10, chloroplastic | 342 | 3e-031 |
| B0JSD9 30S ribosomal protein S10 | 341 | 4e-031 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A1YMX4 30S ribosomal protein S10-like | 530 | 7e-052 |
| Q2V615 Putative uncharacterized protein | 530 | 7e-052 |
| Q5MD13 30S ribosomal protein S10-like | 525 | 3e-051 |
| B9S9Q5 30S ribosomal protein S10, putative | 522 | 6e-051 |
| C6T2U8 Putative uncharacterized protein | 522 | 6e-051 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G13120.1 30S ribosomal protein S10, chloroplast, putative | 531 | 3e-054 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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