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Information for unigene UN40038

FASTA Sequence
Unigene ID: UN40038Length: 1186 SSR 
GGTCACCCACTTTCCTCGAAACATCAGAAACAGTTCAGAAGATGAAACGACGAGGAGCCCTTTAAAAAGTTCTCATCTTTTGAATC
CCGGATCTAACCGGTTTCACTTCGTTTACCCTCTCCTCCGAAATCTCTGGTTCCCTCCCGGATCGGTGATGTACTGAAGCGGGAGA
GAGAGAGAGATGTTGTGCTGGAAGGGTTCGGCTGGGCGGAAGGAGAAAACCGGTTTGCTTCCGGTTTACCTGAATGTCTACGATCT
AACTCCTATGAATGCTTATGGTTACTGGCTCGGTATAGGCGTCTTTCATTCTGGTGTTGAAGTTCATGGAGTTGAATATGCATTTG
GAGCACATGATTCACCAAGCACAGGCATCTTTGAAGTGGAGCCAGAGAAGTGTCCTGGTTTCACGTTTAGGAAATCGATTCTTGTT
GGGAAAACAGACATGGCTGCTAAAGAAGTCCGAGTCTTTATGGAGAAACTAGCTGAAGAGTATCGAGGAAACAAGTACAATCTCAT
CTCTAGGAACTGCAACCATTTTTGCAATGAAGTTTGTGTTAAACTTACTCAGAAACCAATCCCTAGATGGGTCAACCGACTCGCTC
GCTTAGGGGTTCTCTGTAACTGTGTGTTACCACCACGCTTCAACGAGACAAAAGTGAGGCGGGTAGTTAATAAAGGAGAGCTTTCA
GAAGAAGAGAAGAAGAAAAGGAGAAACCGATCTAGATCAGGTCCTTTGCTCTCTACTTCTTCGTCTTCTTCCACACCTGATAGTCA
TCGTTCGCATATGCGAGCAAAATCATTTGGTAACCCTGCTTCTTCTTCTTCTTGTACTTCGGGTTTTAAGAAAAGTAAAAACCAAT
GTGCACCACCACCTACTGCACCTAGAGCTCCAGACCAGAAGTCGCCGAGCGTAGGCGTCAAGACTTGATTCTTATCATCATTATTT
GAACAATTTAATTATTGTCTATGAAAAAAGGACAAAAGAACAGAGGAAAATGCCAAGCAAAGTATCAATCATACATGGGCATGCTC
GTGCTTTGTTCTCAAGTCATTATGGACCTTTTGGGTGTAGATCACTGTTCTTGGTACAATTTACTTATAGAGGAGTGATGTTATGA
GAATTGTACAAAGAAAATGAATTATATATTTGTATGTTTTTATCTCTCATTTCAATACTAAAGTTCCT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002878832 hypothetical protein ARALYDRAFT_481377 [Arabidopsis lyrata subsp. lyrata]9905e-105
NP_565588 PPPDE putative thiol peptidase-like protein [Arabidopsis thaliana]9861e-104
XP_002869301 predicted protein [Arabidopsis lyrata subsp. lyrata]8023e-083
AAL38722 unknown protein [Arabidopsis thaliana]7853e-081
NP_194926 uncharacterized protein [Arabidopsis thaliana]7683e-079

Swiss-Prot top hits (Blast detail)Scoree value
Q93VG8 UPF0326 protein At4g174865332e-053
Q5ZIV7 PPPDE peptidase domain-containing protein 13201e-028
A3QRX8 PPPDE peptidase domain-containing protein 13172e-028
Q5PQ09 PPPDE peptidase domain-containing protein 13172e-028
Q9BSY9 PPPDE peptidase domain-containing protein 13154e-028

TrEMBL top hits (Blast detail)Scoree value
O81728 Expressed protein9861e-104
Q8VZ51 Putative uncharacterized protein At4g319807852e-081
O49393 Putative uncharacterized protein AT4g319807682e-079
B9RNY3 Putative uncharacterized protein7135e-073
Q6NQ19 At5g251707063e-072

Arabidopsis top hits (Blast detail)Scoree value
AT2G25190.1 unknown protein10242e-111
AT4G31980.1 unknown protein7681e-081
AT5G25170.1 unknown protein7062e-074
AT1G80690.1 unknown protein6202e-064
AT1G47740.1 unknown protein5521e-056

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
92  100%

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