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Information for unigene UN40059

FASTA Sequence
Unigene ID: UN40059Length: 795 SSR 
CGCTTTCCTAAAGAATTCGTCATTATCCAAGCATTACCAACAAGCAATACCAAAACGAAGCAAACGAATGCTGAAAATACAAAAAG
AAGTAGGAACTATGAAACCTCAACATCAAAACCTTTTTTATTTGTCACCTAATTTGACTAGATAGTTGTTATAAAGCAGATTGTTC
TTTAATGATGATGATGACGAAACATGTATGTTGTATCTATGATGCTCCATCTACAAGAATGTGAAGGAGAGAATTTGGAAACTCCT
CTCGCTCTTCAAGAATCATTACCAGTAATTTTATTGTTAACCTTGGTTGAGTCTTGGCCATTGATTTAAGATGATGATGATGATTC
ATCTGGCTTCTCGCTGCTACCCTTTGTAGTAGAGGAGGTACCGGGTTGCTGTCTTCCCTTAAAAATACCGGTCAGTCCCCGTGCCT
TAGCAAGTTCTTCAACCTCAGCTAGTTTGCTTTGGAGATCAGCCATTTGCTTTTCCAGTAGTTCATCTTTTTTTCTCAACTCCTCG
AGTTCCTGCTTACGGGCTTCCTCTTTTCTAGCTTCAGAACGTGAACTTCTCTGCACCTCAAAGATAACAACACCTCCACCGACGGC
AAAGATGAAGAGCTCTCCGATGAGGTCAACAGCAGCTTGAACAGCTTTTTCTTCGTTCAAGGGACGAATCTCCACATCGGTGGCGT
GCCCATATATCCTCCTTTTCCTATTACAACAATCTCAATTGACTCTAGAGAAGGATCTCGCTGGCAGCAACTTACAGAATCATGAG
GGAGCTTCTTCTCAGAATCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_564311 Optic atrophy 3 protein (OPA3) [Arabidopsis thaliana]4535e-043
XP_002890780 hypothetical protein ARALYDRAFT_890393 [Arabidopsis lyrata subsp. lyrata]4501e-042
XP_002273293 PREDICTED: hypothetical protein [Vitis vinifera]3872e-035
XP_002331941 predicted protein [Populus trichocarpa]3641e-032
NP_001042554 Os01g0242300 [Oryza sativa Japonica Group]3622e-032

Swiss-Prot top hits (Blast detail)Scoree value
Q9P7W0 OPA3-like protein1342e-007
Q9VCG3 Putative OPA3-like protein CG136031324e-007
Q1L9A2 Optic atrophy 3 protein homolog1324e-007
Q641S2 Optic atrophy 3 protein homolog1243e-006
Q9H6K4 Optic atrophy 3 protein1225e-006

TrEMBL top hits (Blast detail)Scoree value
Q9SGP9 At1g28510/F3M18_54533e-043
B9N9L1 Predicted protein3647e-033
C0P5A9 Putative uncharacterized protein3621e-032
C5XJH2 Putative uncharacterized protein Sb03g0002903621e-032
Q5NA80 Os01g0242300 protein3621e-032

Arabidopsis top hits (Blast detail)Scoree value
AT1G28510.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Optic atrophy 3-like (InterPro:IPR010754); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G58150.1); Has 279 Blast hits to 279 proteins in 116 species: Archae - 0; Bacteria - 0; Metazoa - 133; Fungi - 74; Plants - 40; Viruses - 0; Other Eukaryotes - 32 (source: NCBI BLink).4532e-045
AT3G58150.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Optic atrophy 3-like (InterPro:IPR010754); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G28510.1); Has 268 Blast hits to 268 proteins in 117 species: Archae - 0; Bacteria - 0; Metazoa - 110; Fungi - 74; Plants - 40; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).2462e-021

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
122  100%

Unigene MembersMember information