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Information for unigene UN40085

FASTA Sequence
Unigene ID: UN40085Length: 1183 SSR 
TTTTTCTCATTCTTCTTTCATCAATCTCTCATTTGAGTTTCAAGGTTTTGCTACAGTTAGGGGAAAGGTTGTATCTTGATTTTTGG
TAATGGCTGAGATTTGAGGAAGAAGAAGAAGAAGACTTTCATTTGTCCCTTTTTTATTTTGAAATTTGCGGCGGAGATGAGCGCTT
CGAGGTTCATAAAGTGTGTCACAGTCGGCGATGGTGCTGTCGGAAAAACATGTATGCTGATTTCTTACACCAGCAACACTTTCCCT
ACAGACTATGTTCCAACTGTTTTCGACAACTTCAGTGCTAATGTCGTTGTAGATGGGAACACTGTGAATCTTGGATTGTGGGATAC
AGCCGGTCAAGAAGACTATAGCAGGTTAAGACCATTGAGTTACCGTGGTGCAGATGTCTTCATTCTTGCTTTCTCTCTTATTAGCA
AAGCTAGCTACGAGAACATAGCCAAGAAGTGGATTCCTGAGCTCAGGCATTATGCCCCTGGAGTTCCTATTATCCTCGTTGGAACA
AAACTCGATCTTCGAGATGACAAGCAGTTCTTCGTAGACCATCCTGGTGCAGTGCCGATTACTACAAACCAGGTAGGTAACCCCAA
TTATTCTTTTCAGACACAACCAGATGAGATGTGTCGTCTTAATTGTTTTGTATGCAGGGAGAAGAACTAAAGAAACTGATAGGATC
TCCGGTTTACATTGAGTGTAGTTCAAAGACTCAGCAGGTGGATCTCAGATGTCTGTTCGTTTATGTTTTTTTTTTGTATGTATATA
ACATACTGATAATGTTTTTTGAGTATTGGGGTTATGCAGAACGTTAAAGCAGTCTTTGACGCAGCTATAAAAATGGTGCTTCAGCC
ACCGAATCAAAAGAAGAAGAAATTGAATAAGAGTCTTTGTGTTTTATTGTGACCTCATCTTTTAAAGAAAAATGATCAAGATTTAT
TGGTAGAGACAAAAAGAAAAGAGAGTCTAGCATCAAATGCAGCCTTGGTGGTCATTTGAAGTGAGGCCAAGGGGATTTCTAAGTAA
GAGAAACAGATGAGTTCTTGGTGTGTTGTTGTTCTTGTACTTTTGCTATGTAGACTAATCTCTTAATGCTTTTTTTTTCTAAGGCT
GCTGGAAACCGTTTTGTACTTTTAACAGAAGAGTTTTAGTTAATTTTATCATCGTAATTCTTCTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_177712 Rac-like GTP-binding protein ARAC5 [Arabidopsis thaliana]7442e-076
2NTY Chain C, Rop4-Gdp-Prone87442e-076
XP_002890370 hypothetical protein ARALYDRAFT_472235 [Arabidopsis lyrata subsp. lyrata]7423e-076
AAC78242 Rho-like GTP binding protein [Arabidopsis thaliana]7352e-075
AAD00114 ATGP3 [Arabidopsis thaliana]7342e-075

Swiss-Prot top hits (Blast detail)Scoree value
Q38937 Rac-like GTP-binding protein ARAC57447e-078
Q38919 Rac-like GTP-binding protein ARAC47331e-076
Q6ZHA3 Rac-like GTP-binding protein 67294e-076
Q6EP31 Rac-like GTP-binding protein 57204e-075
P92978 Rac-like GTP-binding protein ARAC117171e-074

TrEMBL top hits (Blast detail)Scoree value
Q0WU07 RAC-like GTP-binding protein ARAC47332e-075
A5CAU5 Putative uncharacterized protein7305e-075
A9P811 Predicted protein7305e-075
C5XT00 Putative uncharacterized protein Sb04g0016907296e-075
Q0E4G2 Os02g0120800 protein7296e-075

Arabidopsis top hits (Blast detail)Scoree value
AT1G75840.1 ARAC5 (RAC-LIKE GTP BINDING PROTEIN 5); GTP binding / GTPase7446e-079
AT1G20090.1 ROP2 (RHO-RELATED PROTEIN FROM PLANTS 2); GTP binding7331e-077
AT3G51300.1 ROP1 (RHO-RELATED PROTEIN FROM PLANTS 1); GTP binding / GTPase activating protein binding / GTPase/ protein binding7179e-076
AT2G17800.1 ARAC1; GTP binding7114e-075
AT2G17800.2 ARAC1; GTP binding7114e-075

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
71  33%
 
82  67%

Unigene MembersMember information