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Information for unigene UN40095
| FASTA Sequence |
| Unigene ID: UN40095 | Length: 1025 |
SSR | | GAGTTTTATAAGTTATTATGTAATAAAAAGAAACCAAACATTTAGTTACAATTGATCAAATATGAAACATTGCTACTTTTCCCCTT
ACTGTCTACTTTTGTGCACTATAGAGTTTGTGATGTCTCTTTCTCTCTCTCTCTGGCTATCTATCCATGGCTTAAGGGATCAGTAA
CCTGATGCACCTTGCGGGCTTCGGCGCTGCTGTACTGTCCCACGGCTCGAGCATGAGGAATTGATCGCTTTCCGGCTGCAAGGGCA
TTGACATTCTCAACTAGATACTGTCTCGGGAGCCTCCCCACCACATTACCTTCCTCGTTCCCTTGTCGATCGAGGAAAGCGAAATG
AGGAATACCTTCAACACCAAACTCATCCAGCTCTTGCTCCCATTTCGTGTTGTCCACATTTAGCATCACAAAGTTCACTTTGTCCT
TGTATTGCTGCTCGATTTTGTAAACATCAGGGGCTAGTTCTCGACAAACCTCACACCAATCAGCATAGAACTCAACCACTGTCGGC
TTCCCGTTCGACAAAGCCTCCTCGTAAGGCAACGCTGAAGCAGTTAAATCCTTCAAAGAAATCCCAAAATCAAGCCTCGTCGATAG
AAACAAGGCCAAAGCGACAACAACAGAACCAACAGCGACTCTTCTGTTAATATCCCTGTTTGGAGACTCAGGAAACCCAGAAGAAG
AAGAAGAAGAAGAAGGTGAAATTTCACTAGTAGAGCCATTATCCACCACCAGTTTCTCCTGAATCATGGAAAGAAGATTACTTTTA
GCTAAATTTGCCATCGACCCATATTAACAAAATCGAAACTTTTTCACCTTGGGTTCGGAAGATTCAGGGGTTGCTTGGCAACGAAG
AGCACGAAATCCAGGAGGAGGTCCTGTTTGGGTTAGGAGAAAAGGTTGATAATTTCGATTGATTCCATGATGAGTAGTTGTTGATG
GAAGGCTCAACGAAAACACTAACCCAGCTGCCATCTTCACTAAAGGTTTCAACTTTACAATGATTCTCAGAATACACCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_195437 thioredoxin-like protein HCF164 [Arabidopsis thaliana] | 911 | 6e-096 |
| XP_002869014 HCF164 [Arabidopsis lyrata subsp. lyrata] | 906 | 2e-095 |
| XP_002522379 Thiol:disulfide interchange protein txlA, putative [Ricinus communis] | 820 | 2e-085 |
| XP_002265898 PREDICTED: hypothetical protein [Vitis vinifera] | 817 | 5e-085 |
| CBI38364 unnamed protein product [Vitis vinifera] | 811 | 2e-084 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O23166 Thioredoxin-like protein HCF164, chloroplastic | 911 | 3e-097 |
| Q7Y0D4 Thioredoxin-like protein HCF164, chloroplastic | 773 | 3e-081 |
| P73920 Thiol:disulfide interchange protein txlA homolog | 339 | 5e-031 |
| P35088 Thiol:disulfide interchange protein txlA | 309 | 2e-027 |
| P23400 Thioredoxin M-type, chloroplastic | 138 | 1e-007 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9S8R0 Thiol:disulfide interchange protein txlA, putative | 820 | 1e-085 |
| B9HEG9 Predicted protein | 781 | 5e-081 |
| B6UAV4 Thiol disulfide interchange protein txlA | 752 | 1e-077 |
| B8ANT8 Putative uncharacterized protein | 650 | 7e-066 |
| B9F5W3 Putative uncharacterized protein | 650 | 7e-066 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G37200.1 HCF164; oxidoreductase, acting on sulfur group of donors, disulfide as acceptor | 912 | 2e-098 |
| AT1G21750.1 ATPDIL1-1 (PDI-LIKE 1-1); protein disulfide isomerase | 124 | 4e-007 |
| AT1G21750.2 ATPDIL1-1 (PDI-LIKE 1-1); protein disulfide isomerase | 124 | 4e-007 |
| AT2G47470.2 UNE5 (UNFERTILIZED EMBRYO SAC 5); protein disulfide isomerase | 124 | 4e-007 |
| AT2G47470.1 UNE5 (UNFERTILIZED EMBRYO SAC 5); protein disulfide isomerase | 124 | 4e-007 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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