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Information for unigene UN40103
| FASTA Sequence |
| Unigene ID: UN40103 | Length: 1063 |
SSR | | GGAAAACAGAACACACTTGTTGGAATTGAGATCGATTTTTGGGTTCAGACTCTGTCTGTCAAACTTGATTGCCGCGAAGATTTACA
CAATTTCCATAGCATCGAATCTTAAAAAGAGCGAAAGTTTCTCTCTTTGGAGCGAGATTTGGAGGGTGAGATCGAGCTCTGGAAGT
GAGATGAAATCTTAAGAAGGAAAGATGGGTAGAGAGATGTCGTTTTTGTTACAGCCCAGGTGCCTTCAACACCGGCAAGGAGGAGG
AGAAGCAAGTGATCCAGGATTATGAAATCACACACAGAGTGTTTCTCGATGTTGATATCGACGGCCAACGCTTAGGCAGGATCGTT
ATTGGATTATATGGCACTGTTGTACCCAAAACTGTTGAAAACTTCAGGGCATTATGCACAGGAGAGAAGGGGAAAACTTCAAGCGG
GAAGCCTCTGCACTATAAAGGAACACCCTTTCATAGAATAATATCTGGATTCGTAATCCAAGGAGGAGACATCATCCATGGTGATG
GCAAAGGGAGTGACTCAATCTATGGTGGTACCTTTCCTGACGAAAATTTCAAGATTAAGCATTCACATGCAGGTGTTGTAGCGATG
GCTAATACAGGACCTGATTCTAATGGCTCACAGTTCTTTATCACTACTGTCAAGGCTAGCTGGTTGGAAGGGGAGCATGTTGTGTT
TGGGAAGGTGATACTAGGAATGGACAATGTGTTCGCCATTGGAGGTGGAGCCGGTACTTACAGTGGCAAACCAAGGAAGAAAGTTG
TGATTGCTGATTCTGGAGAGATCCCTAAAGACAAATGGGAAGAAGAAAGATGACAGAACATAAAAAGCTTAGACATCTCAGCAAAT
CTTGGCCCTTTTCCTACGAGATCCTCTCTCTCTCTTTTTTAATTTATAGTTTTGCAGATGCGATGATCTGAATTCTGAACACAATC
CCAATGTAGTTAGTGTTTTTAAAGCTGGACGCATCTTGTACCTCTTTACTTCAGTTTTTTTCTTCTCAGTATACTTTATTTATTTG
ATTTTCTTAGTTCAGTTTACATTTATGTAGT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_195222 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein [Arabidopsis thaliana] | 985 | 2e-104 |
| XP_002869115 hypothetical protein ARALYDRAFT_491161 [Arabidopsis lyrata subsp. lyrata] | 985 | 2e-104 |
| BAF81521 putative peptidyl-prolyl cis-trans isomerase [Brassica rapa] | 926 | 1e-097 |
| XP_002313720 predicted protein [Populus trichocarpa] | 861 | 4e-090 |
| XP_002533862 peptidyl-prolyl cis-trans isomerase, putative [Ricinus communis] | 859 | 7e-090 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8LDP4 Peptidyl-prolyl cis-trans isomerase CYP19-4 | 620 | 1e-063 |
| Q9SP02 Peptidyl-prolyl cis-trans isomerase CYP20-1 | 600 | 3e-061 |
| Q9TW32 Peptidyl-prolyl cis-trans isomerase B | 561 | 1e-056 |
| P52015 Peptidyl-prolyl cis-trans isomerase 7 | 536 | 8e-054 |
| P52011 Peptidyl-prolyl cis-trans isomerase 3 | 527 | 9e-053 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| O49605 Peptidyl-prolyl cis-trans isomerase | 985 | 1e-104 |
| A8CF54 Peptidyl-prolyl cis-trans isomerase | 926 | 8e-098 |
| B9HR79 Predicted protein | 861 | 3e-090 |
| B9T6J3 Peptidyl-prolyl cis-trans isomerase | 859 | 5e-090 |
| C6TGD4 Peptidyl-prolyl cis-trans isomerase | 829 | 1e-086 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G34960.1 peptidyl-prolyl cis-trans isomerase, putative / cyclophilin, putative / rotamase, putative | 986 | 5e-107 |
| AT2G29960.1 CYP5 (CYCLOPHILIN 5); peptidyl-prolyl cis-trans isomerase | 620 | 1e-064 |
| AT5G58710.1 ROC7; peptidyl-prolyl cis-trans isomerase | 600 | 3e-062 |
| AT3G55920.1 peptidyl-prolyl cis-trans isomerase, putative / cyclophilin, putative / rotamase, putative | 567 | 2e-058 |
| AT4G38740.1 ROC1 (ROTAMASE CYP 1); peptidyl-prolyl cis-trans isomerase | 510 | 8e-052 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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