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Information for unigene UN40131
| FASTA Sequence |
| Unigene ID: UN40131 | Length: 1166 |
SSR | | GGGTCTCTCTGTCTGCGACTCACATTCATCCAACTCTCTCTAGCTATGTCAACATCCGAGAACAAAGTGGAAATCATCGACAGGGG
CCACCACAAGGAAGAGGAGAAAAAAGAAGAAGGCAAAGAAGGAGGCTTCCTCGACAAGGTTAAAGACTTCATCCACGACATCGGCG
AGAAGATCGAAGAAACCATCGGCTTCGGCAAACCAACCGCCGACGTCTCCGCCATCCACATCCCCAAGATCAACCTCGAGAGAGCA
GACATCGTCGTCGACGTCCTCGTCAAGAACCCTAACCCCGTCCCCATCCCCTTGATCGACATCGACTACTTAGTCGAGAGCGACGG
TAGGAAACTCGTCTCTGGCCTCATCCCCGACTCGGGAACCATCAAGGCCCACGGGGAAGAGACCGTCAAGATCCCCCTGACTCTCA
TCTACGAAGACATTAAGAGCACTTACAACGACATCAACCCCGGGATGATCATTCCTTACAGGATCAAAGTCGATCTCATCGTCGAC
GTGTCTGTCTTCGGGAGGCTGACGTTGCCCTTGGAGAAGCGCGGGGAGATTCCTATACCTAAGAAGCCTGATGTAGACATTGAGAA
GATCAAGTTCCAGAAGTTTTCTTTGGAGGAGACGGTTGCGATTCTCCACGTGAGGCTTGAGAACATGAATGATTTTGACTTGGGGC
TTAACGACTTGGACTGTGAGGTTTGGTTGAGTGATGTGAGTATTGGGAAAGCTGAGATAGCGGATTCTATTAAGCTTGATAAGAAC
GGGAGCGGGTTGGTTAACGTGCCCATCACGTTTAGGCCGAAGGACTTTGGGTCTGCGCTTTGGGATATGATTCGTGGTAAAGGGAC
GGGGTATACTATTAAAGGGAATGTGGATGTTGATACTCCGTTTGGTGCTATGAAGCTTCCTATTGTTAAGGAAGGTGGTGAGACTC
GTTTGAAGAAGGAAGATGATGATGATGATGATGACGAATGAGGAGTAAGGGAAAGAGCTCAAGAGAATGAGTGTGGTTTTAAGTAA
TGAATCTTCCATCTTTATAAAATAATGTTTTAAGTTAAACTGGGGACTTGTGTTTGGTGTGTGTTGTTGATGACTGATGGATCAGA
CTTTTCAGTAGTGCTTCCCTATATCAGTGTGGTCCAGTTTGGATGGTG
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_181934 Late embryogenesis abundant protein, group 2 [Arabidopsis thaliana] | 1472 | 6e-161 |
| AAM64433 similar to late embryogenesis abundant proteins [Arabidopsis thaliana] | 1467 | 2e-160 |
| XP_002880080 predicted protein [Arabidopsis lyrata subsp. lyrata] | 1460 | 2e-159 |
| XP_002533345 Late embryogenesis abundant protein Lea14-A, putative [Ricinus communis] | 1280 | 1e-138 |
| CBI24768 unnamed protein product [Vitis vinifera] | 1265 | 6e-137 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O82355 Desiccation-related protein At2g46140 | 191 | 1e-013 |
| P32323 A-agglutinin anchorage subunit | 157 | 8e-010 |
| P47179 Cell wall protein DAN4 | 141 | 6e-008 |
| P87179 Cell wall integrity and stress response component 1 | 139 | 1e-007 |
| P53832 Cell wall integrity and stress response component 2 | 137 | 2e-007 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| O80576 At2g44060 | 1472 | 4e-161 |
| Q8LCW6 Similar to late embryogenesis abundant proteins | 1467 | 2e-160 |
| B9T526 Late embryogenesis abundant protein Lea14-A, putative | 1280 | 8e-139 |
| C6T750 Late-embryogenesis abundant protein 2 | 1251 | 2e-135 |
| A5B1L7 Putative uncharacterized protein | 1249 | 3e-135 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G44060.1 late embryogenesis abundant family protein / LEA family protein | 1473 | 2e-163 |
| AT2G44060.2 late embryogenesis abundant family protein / LEA family protein | 1473 | 2e-163 |
| AT2G46140.1 late embryogenesis abundant protein, putative / LEA protein, putative | 191 | 8e-015 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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