Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN40142

FASTA Sequence
Unigene ID: UN40142Length: 893 SSR 
GCTTAATAGCAAAACTTTCACGAAAAGATTTTGATACAAAGAAAAGAAAACAAACCAGAAACAAACAACACTCCATATGATTTTAA
AAATAAAAATGGTCACAAGAGAGAGAGATTATGTCCGTAGAACAGTAGGTGAAAACACACAAAGAGAAACAAGCTGATGGACAGTG
AGAGAGAGATGACAGGGTACCAAAATCAGAACAAAGAGAGAGAGAGAGTGCCTTAGGAAACAAGTAAAAACCTTTCTTCTCAGGTA
AGACAAATGCGAACTTTTTTTCTTCCTTCACAGCAGATCAGCAACGTTGGAAGGCAGCTCCTCAACAACCACATTATAAAACTTCT
GAATATCAAACAACATCCTCTCATCATCCTTGGTCACAAAGTTGATCGCCACACCATTCCTCCCAAACCTCCCACTCCTTCCGATA
CGGTGCTGGTAGTTCTCAGGCTGAGTCGGCAAATCGTAGTTGATCACCAGCGACACCTGCTGCACATCGATCCCACGAGCCAACAG
ATCAGTCGTAATAAGCACACGCGAGGAGCCAGACCTGAACTCCCTCATAATAATATCCCTCGTGTTCTGGTCCATGTCTCCGTGAG
ACGCAGAAACAGTATGGTCGCGCCCCCTCATCTTGTCGGTGAGCCAGTCCACTTTCCTCCTAGTGTTCACGAAGATGACGCTCTGA
GTGATGGCCAGCGTCTCGTAGAGATCACAAAGCGTCTCGAGCTTCCACTCTTCCTTCTCAACGTTCACGTAGAACTGCTTGATACC
TTCCAAGGTGAGCTCGTCGCGCTTCACAAGTATCCTCACCGGCTTGCTCATGAACTTCCTCGTGATCTCGAGAGCTTCGGGAGGCA
TGGTCGCAGAGAAGACTCCGACCTGGATCTTGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
P41378 RecName: Full=Eukaryotic initiation factor 4A; Short=eIF-4A; AltName: Full=ATP-dependent RNA helicase eIF4A9993e-106
NP_566469 translational initiation factor 4A-1 [Arabidopsis thaliana]9967e-106
CAC43286 translation initiation factor eIF-4A1 [Arabidopsis thaliana]9967e-106
BAE98559 eukaryotic protein synthesis initiation factor 4A [Arabidopsis thaliana]9967e-106
NP_001078148 translational initiation factor 4A-1 [Arabidopsis thaliana]9967e-106

Swiss-Prot top hits (Blast detail)Scoree value
P41378 Eukaryotic initiation factor 4A9991e-107
P41376 Eukaryotic initiation factor 4A-19963e-107
P35683 Eukaryotic initiation factor 4A-19937e-107
Q40465 Eukaryotic initiation factor 4A-119911e-106
Q40469 Eukaryotic initiation factor 4A-6 (Fragment)9911e-106

TrEMBL top hits (Blast detail)Scoree value
A8MRZ7 Uncharacterized protein At3g13920.39964e-106
A5BNE8 Putative uncharacterized protein9948e-106
A9PA53 Predicted protein9948e-106
B9P8S3 Predicted protein (Fragment)9948e-106
B7EPR0 cDNA clone:001-114-H08, full insert sequence9931e-105

Arabidopsis top hits (Blast detail)Scoree value
AT3G13920.1 EIF4A1 (EUKARYOTIC TRANSLATION INITIATION FACTOR 4A1); ATP-dependent helicase/ translation initiation factor9972e-108
AT3G13920.3 EIF4A1 (EUKARYOTIC TRANSLATION INITIATION FACTOR 4A1); ATP-dependent helicase/ translation initiation factor9972e-108
AT1G54270.1 EIF4A-2; ATP-dependent helicase/ translation initiation factor9873e-107
AT1G72730.1 eukaryotic translation initiation factor 4A, putative / eIF-4A, putative9685e-105
AT3G13920.2 EIF4A1 (EUKARYOTIC TRANSLATION INITIATION FACTOR 4A1); ATP-dependent helicase/ translation initiation factor8862e-095

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
83  100%

Unigene MembersMember information