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Information for unigene UN40146

FASTA Sequence
Unigene ID: UN40146Length: 988 SSR 
ATAATGATAAAACATCATTCAACAAATAGAAGGTTGATAAGTAGAGAATATATATAACAAATACATCAAATAAAAACATACACTCT
ACAAGCTTGGATACAGCAAACTGGTTTATAAAGTCACTCACAAACCTTCCCCTCAAAGCAACAAATAATACACTAAACGTTACTCA
CCAATAAATTCTTTTTTATTATTATTTTGATTTTTTTTTTCCTTCCTCCTGGCCCAAGGAAATCTCCACCTCTTGGATAGTTTGAA
AAATCAAATTCTAAGCGTGAAGCTCGTGAAGCTGGCTCCTCACTGACCCATAAGCCCTCATAGCACCAGCTCTCAACACAAACTGG
TGGTACAAAGCTGCAATTGCTGCTCCCACAAATGGACCGACCCAGAAGATCCATTGATCATCCCAAGCCTTTTGATTGTTGTAGAT
GACTGCAGCTCCAAAACTCCTAGCCGGGTTAATTCCAGTTCCAGTGATTGGGATTGTGGCTAAATGAACCATGAACACCGAAAATC
CAATTGGCAATGGTGCCAATACAGGAATGTGAGAGTCACGGGCATTACGCTTAGGGTCTGTAGCGGAGAAGACCGTGTAGACAAGG
ACAAATGTGCCGATAATCTCAGCACCAACACCAACACCAACGTTGTATCCGTCGGCGAGGACGTTGGCTCCACCGCCATATCGGTT
GTAATAAGTTTTCTGGAAGACTTTCACCAAACCAACTCCGCAAGTGGCTCCGAGACACTGAGCCACTATGTAGGATATAGCTCTCA
CCAACGGCACCTTGCTAGCCAAGAATAGTCCAAACGTCACTGCAGGGTTAATGTGCCCACCAGAGATGCCGGCAGTGCAGTAGACA
AGGATGAAGATCATGCCGGACAACGACTCCTCCTCCGTCAAGTCTGTCGACATTGTTTATTTTTTATGTGGTATATACTTATGTAG
CTTCCACAGAGTTAGAGAGAGAGAGAGAAGGGATGTGGCTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ABL97985 water channel protein [Brassica rapa]10479e-112
BAJ34489 unnamed protein product [Thellungiella halophila]10334e-110
NP_181434 putative aquaporin PIP2-6 [Arabidopsis thaliana]10281e-109
XP_002879778 PIP2_6/PIP2E [Arabidopsis lyrata subsp. lyrata]10244e-109
ABB88840 aquaporin [Stevia rebaudiana]9081e-095

Swiss-Prot top hits (Blast detail)Scoree value
Q9ZV07 Probable aquaporin PIP2-610287e-111
P43287 Aquaporin PIP2-28801e-093
Q8H5N9 Probable aquaporin PIP2-18791e-093
Q9FF53 Probable aquaporin PIP2-48782e-093
Q84RL7 Aquaporin PIP2-18728e-093

TrEMBL top hits (Blast detail)Scoree value
A1YMX9 Water channel protein10476e-112
Q2I6J7 Aquaporin (Fragment)9089e-096
C6TEH7 Putative uncharacterized protein9071e-095
C6TJQ0 Putative uncharacterized protein9052e-095
A5C9F9 Putative uncharacterized protein9033e-095

Arabidopsis top hits (Blast detail)Scoree value
AT2G39010.1 PIP2E (PLASMA MEMBRANE INTRINSIC PROTEIN 2E); water channel10295e-112
AT2G37170.1 PIP2B (PLASMA MEMBRANE INTRINSIC PROTEIN 2); water channel8809e-095
AT5G60660.1 PIP2;4 (PLASMA MEMBRANE INTRINSIC PROTEIN 2;4); water channel8781e-094
AT3G54820.1 PIP2;5 (PLASMA MEMBRANE INTRINSIC PROTEIN 2;5); water channel8692e-093
AT3G53420.1 PIP2A (PLASMA MEMBRANE INTRINSIC PROTEIN 2A); water channel8655e-093

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
73  60%
 
81  20%
 
91  20%

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