 |
Information for unigene UN40175
| FASTA Sequence |
| Unigene ID: UN40175 | Length: 1064 |
SSR | | GGAGTCTCTACGCGTTTCAGCTTTAAGTCTTTTCTAGATCTTCTCTACCTTCCTTCACGCCGTTATAATAACAAAACTCTCTGATC
AGTCAATAAAATCCATCGGAACAGCGTTGTTGTTTTTTTTGTTCCCAGTAGAGAGAGAGAGAGAACACAGGAAAAAAAAAGGGATG
GCGCAACAGCAACAATCGTTGATCTACAGTTTCGTGGCTCGCGGGACGGTGATCCTGGTGGAGTTCACGGATTTCAAGGGAAATTT
CACATCGATCGCTGCACAGTGTCTCCAAAAGCTTCCTTCTTCCAACAACAAGTTCACCTACAACTGCGATGGTCATACCTTCAATT
ACTTGGTTGAAAATGGATTCACTTATTGTGTTGTTGCAGTTGATTCTGCTGGGAGGCAAATTCCTATGGCTTTCTTGGAGCGAGTT
AAGGAGGATTTCAACAAGAGATATGGTGGTGGCAAGGCTGCTACTGCTCAACCCAACTCCTTGAATAAGGAATTTGGGTCGAAACT
GAAAGAGCACATGCAGTATTGTATGGATCATCCTGATGAGATTAGCAAGCTTGCTAAGGTTAAAGCTCAAGTTTCTGAAGTTAAAG
GTGTCATGATGGAAAACATTGAGAAGGTCCTTGACCGTGGTGAGAAAATCGAACTTTTGGTGGACAAAACCGAAAACCTTCGCTCA
CAGGCGCAAGATTTCAGAACACAAGGAACACAAATGAGAAGAAAGATGTGGTTTCAGAACATGAAGATAAAGCTCATTGTTCTTGC
AATCATCATCTCCTTGATCCTCATCATCGTCCTCTCAGTCTGCGGTGGCTTCAACTGCGGCAAATAAGTCTGGAACATCTCTGATT
TCCGAGAACATCATCCTCATTCAGTTTGTTGTGCTTTTTTTCTTTTTGGTTTAAAATTTCTCATGGCTATGTTTCTCTTGCTTAGA
TTTGCACTTGTTGAAATTGGTTTTGTATAGGTCATATATATATGTATGAAACTGATTCTTGCAAACCATTTACTTGGACCTAATTT
GAACGCTTGTGTTTGCTTTGGTCTTTCTATTA
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_180871 vesicle-associated membrane protein 722 [Arabidopsis thaliana] | 1115 | 1e-119 |
| AAA56991 formerly called HAT24; synaptobrevin-related protein [Arabidopsis thaliana] | 1107 | 1e-118 |
| XP_002892239 vesicle-associated membrane protein 7B [Arabidopsis lyrata subsp. lyrata] | 1075 | 6e-115 |
| NP_171967 vesicle-associated membrane protein 721 [Arabidopsis thaliana] | 1072 | 1e-114 |
| BAD43410 putative vesicle-associated membrane protein, synaptobrevin 7B [Arabidopsis thaliana] | 1068 | 4e-114 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P47192 Vesicle-associated membrane protein 722 | 1115 | 6e-121 |
| Q9ZTW3 Vesicle-associated membrane protein 721 | 1072 | 6e-116 |
| O48850 Vesicle-associated membrane protein 725 | 1048 | 4e-113 |
| Q9MAS5 Putative vesicle-associated membrane protein 726 | 1018 | 1e-109 |
| Q8VY69 Vesicle-associated membrane protein 723 | 898 | 9e-096 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q681L9 Putative vesicle-associated membrane protein, synaptobrevin 7B | 1072 | 9e-115 |
| Q681H0 Putative vesicle-associated membrane protein, synaptobrevin 7B | 1068 | 3e-114 |
| B9H095 Predicted protein | 1026 | 2e-109 |
| B9RWK6 Vesicle-associated membrane protein, putative | 1021 | 8e-109 |
| C6TNZ7 Putative uncharacterized protein | 1019 | 1e-108 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
