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Information for unigene UN40184
| FASTA Sequence |
| Unigene ID: UN40184 | Length: 922 |
SSR | | GGAAGCTCTTTCAAAGCTCCCTTCGAAATCTCCGTCTCTTCTCCTTCTTCTCTCTCTCTCTCACTCGATTGGCAATGGCTGCCCCC
AACTCCATTTTCACCGCCGCACCGTCGCGAAATCTAGCACGTATCTCTCTCCACCAGTCATCATTGTCTTCACCGTTGAGTCCCCG
GGTCACCAGATCGAACTCCGTCGCATTTCGTCCCAAACCCCGATCCAGCTCGCTCGTCTTCTGCTCCACCGATGAATCAAATGTCT
CCTCCGCAGAGAAAGAGATCCCAATTGAACTCAGGTACGAGGCTTATCCGACAGTGATGGACATTAACCAGATACGAGACATTCTG
CCTCACAGGTTCCCGTTTCTGTTAGTGGATAGAGTGATAGAGTACACAGCTGGGGAATCTGCGGTGGCTATCAAGAATGTGACCAT
TAATGACAATTTCTTTCCTGGGCATTTCCCTGAGAGGCCCATCATGCCTGGTGTCCTCATGGTTGAGGCGATGGCTCAGGTGGGAG
GAATAGTGATGCTGAATCCAGAAGTGGGGGGATCTAAAAGCAACTTCTTCTTTGCTGGAGTCGACAAAGTCAGGTTCAGAAAGCCT
GTGATTGCTGGTGACACTCTGGTGATGAGGATGACGCTTGTGAAGCTGCAGAAGCGGTTTGGGATAGCCAAAATGGAAGGGAAAGC
ATACGTAGGGAACACTTTGGTATGCGAAGGAGAGTTCTTGATGGCTATGGGAAAAGAAGAGGAGTGATCATCTTCTCATTGCCTTT
TGCTTCTTCTTTTTTTCTCCTTACCCCTTGTGGGTACGAGTTATTTATCACACATTTGAGTCTTATTTCTATCTCCAGTTTCTGTT
GTTTGTTACGAATGCTGTTGACCATTTAAAAGAAAATAATGAATTGGAATTATCACATCTTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| AAZ66933 117M18_14 [Brassica rapa] | 1059 | 3e-113 |
| AAK60545 putative 3-keto-acyl-ACP dehydratase [Brassica napus] | 971 | 5e-103 |
| NP_196578 3R-hydroxymyristoyl ACP dehydrase [Arabidopsis thaliana] | 950 | 1e-100 |
| XP_002871407 hypothetical protein ARALYDRAFT_487843 [Arabidopsis lyrata subsp. lyrata] | 942 | 1e-099 |
| ACQ44222 putative beta-hydroxyacyl-ACP dehydratase [Arabis alpina] | 928 | 5e-098 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8KBX0 Bifunctional enzyme lpxC/fabZ | 393 | 3e-037 |
| Q2JI59 (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase | 389 | 7e-037 |
| Q2JTA0 (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase | 388 | 1e-036 |
| Q5KUM2 (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase | 358 | 3e-033 |
| P61453 (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase | 357 | 4e-033 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q4AC06 117M18_14 | 1059 | 2e-113 |
| Q94F93 Putative 3-keto-acyl-ACP dehydratase | 971 | 4e-103 |
| Q9LX13 (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase-like protein | 950 | 1e-100 |
| C3UJT3 Putative beta-hydroxyacyl-ACP dehydratase | 928 | 4e-098 |
| A9PGE4 Predicted protein | 767 | 2e-079 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G10160.1 beta-hydroxyacyl-ACP dehydratase, putative | 967 | 6e-105 |
| AT2G22230.1 beta-hydroxyacyl-ACP dehydratase, putative | 767 | 1e-081 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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