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Information for unigene UN40213

FASTA Sequence
Unigene ID: UN40213Length: 419  SNP
TCCGCAACAAGTTCTACTGCCCCATCGTCAACCTCGACAAGCTATGGTCACTCGTCCCCGAGGATGTGAAGGGGAAGGCCACAAAG
GACAAGGTGCCGATGATCGATGTGACGCAGCACGGGTTCTTCAAGGTTCTTGGGAAAGGTCATTTGCCTGAGGGAAAGCCTTTCGT
TGTGAAGGCTAAGCTCATTTCCAAGACTGCTGAGAAGAAGATCAAGGAGGCTGGTGGCGCCGTCGTGCTCACTGCCTAGGGTTAGG
TCTGTTTTTTACGTTTTGCTTTTTTAAGTATTGTCTTTTGGAATCGTTGTTGGACTCAGAGTTTGTTGCTTTTTGGAATGAGAGAT
CTTTTAATCAATATTATTGGATTTTATAATCGTCATTTCAGTTAAATGTGGTATTGATTGATATGGTTTTTTTCG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ABM30196 ribosomal large subunit structural protein [Brassica juncea]4045e-038
NP_177217 60S ribosomal protein L27a-3 [Arabidopsis thaliana]3992e-037
NP_173743 60S ribosomal protein L27a-2 [Arabidopsis thaliana]3955e-037
AAM62795 60S ribosomal protein L27A [Arabidopsis thaliana]3947e-037
ABK92884 unknown [Populus trichocarpa]3598e-033

Swiss-Prot top hits (Blast detail)Scoree value
P49637 60S ribosomal protein L27a-33997e-039
Q9LR33 60S ribosomal protein L27a-23952e-038
P48161 60S ribosomal protein L27a2482e-021
Q00454 60S ribosomal protein L27a2446e-021
O01358 60S ribosomal protein L27a2392e-020

TrEMBL top hits (Blast detail)Scoree value
A1Z1S1 Ribosomal large subunit structural protein4043e-038
Q7G923 60S ribosomal protein L27A; 71521-710813991e-037
A9P931 Putative uncharacterized protein3595e-033
A9PC30 Putative uncharacterized protein3561e-032
A9PD59 Putative uncharacterized protein3561e-032

Arabidopsis top hits (Blast detail)Scoree value
AT1G70600.1 structural constituent of ribosome4009e-040
AT1G23290.1 RPL27AB; structural constituent of ribosome3963e-039
AT1G12960.1 60S ribosomal protein L27A (RPL27aA)1472e-010

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
63  43%
 
82  29%
 
102  29%

Unigene MembersMember information