Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN40215

FASTA Sequence
Unigene ID: UN40215Length: 1208 SSR 
GGATAATAACTTTATCTTAAAAAAGAATTCATATCAATACACTCAGTCAGGTGTACAAGCATATTGACAATGACAGTGATAAACAA
TCTTACATTTAGAATTCAAAAAAAAAAAAAACTCTTGGGGGCAGAAAAGCTTCTCTACTTGAAATAGAGTGGGACCAGTTTCTTCA
AGGTTTCAAACACACTTGTGAAGGGATCAAACTGGACTGGCTTACTTAGTTCAAGATCTGGAAACTGGTTTGTCAGCGTTTTCTCC
ATACCTGGCATGGACATCATAGCAGCTAGCTGACCATCAGACATCACTTCACAGTCCTGTGGAGTATCCTTTATTTTCTCCGGGTC
GTACCCAAACTGCCCCAAATAGTCTTTGTACTTGGCTATGAACTCAGGTCCCGGGTTAGGTGTCCTTGAGTATACCTGAACAAAGC
TCCTGTCTTTGGCTCCAGAAACAAGAGCGTAGTTGTCATAGTCTGTAGCTATGACATCATAAGGCAACTTGGGGATGAAAGGAATG
GTGGGAAACCGAAGGTAACATTTCTCTTTAATCATCTCTTGCTTTTCTAAGTCAGTCTCAGTTTTCTCCAGGTCTTGTGCTCTAAC
GCATTGAACTTTTCCTCTGATTCCTGTTATATACCCATCGGGGCTACCGTGAACGCAAAACGTGTCTACCCTTATAGCTGGTTCCT
TCATATCAAACGTGTATACTCCCTGTGTGCAATGGCAATCTTCTTGGCCTTGACCAGCAAAGCCACGCTTAAGAGAAGCTACTTCA
AACCATCTTCCAGAGTACCTAACTGGGTCAAAGTTCTTGGCAGTCATGCCTTTCATCATCATCATCATCATCATCTCCTCCGGGTC
ACTATCAAGTGGAAGAGTAGGTTTGTTTTCTTCCACAGCAGCACTTCCAGTTGACAAATGTTGTGATCCAATGCAACACCCTGGCC
TGCCTGAGAGAGAAGCAAAATGGTAGCAAAGCCTGCAACAAAATGCTTTCTTAAAGTCTCCTTGATTTCAATGGGATTCTCCAAGA
AACATTTTACTGTTGACTTCTTCAGAGACCCTTTGGAATTGTGCGATCTACTGTTGATCCTCCTAACCGCAAAACTTCTTCTCGTA
TTTGCAGGTCGAGTGAAGCTCTGGGGAAGAACTAGTGTCGTTGACAGGCTAGTTATGATGTTACTTGCCATCTTCTCTTGGTAGCC
ACCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002877581 hypothetical protein ARALYDRAFT_485150 [Arabidopsis lyrata subsp. lyrata]12137e-131
NP_190370 chloroplastic lipocalin [Arabidopsis thaliana]11967e-129
ABB02410 chloroplast lipocalin [Solanum tuberosum]10757e-115
XP_002281469 PREDICTED: hypothetical protein [Vitis vinifera]10694e-114
CBI23955 unnamed protein product [Vitis vinifera]10694e-114

Swiss-Prot top hits (Blast detail)Scoree value
P51910 Apolipoprotein D1273e-006

TrEMBL top hits (Blast detail)Scoree value
Q9STS7 Putative uncharacterized protein At3g4786012011e-129
Q38JB4 Chloroplast lipocalin10755e-115
B9SAI0 Putative uncharacterized protein10683e-114
Q38JB5 Chloroplast lipocalin10649e-114
Q38JB2 Chloroplast lipocalin10532e-112

Arabidopsis top hits (Blast detail)Scoree value
AT3G47860.1 apolipoprotein D-related12025e-132

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  33%
 
81  33%
 
101  33%

Unigene MembersMember information