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Information for unigene UN40239

FASTA Sequence
Unigene ID: UN40239Length: 695 SSR 
GCTCGGAACTGAAATTGCATTACGTTTTACGATCAAACCGATTATAAACTGAAGTTCAATCAAACCATGTTTGGCAAGGTTTGTTC
CGAAGAATGAGTAGAAATAAGGCACTAAGAGCTACTCTCTTCGGACAGAGCAGTCGTACAAAAAAAACTGAGTAGAGCGTCACGTG
GCTTCTTTCAAGTCATATCATCGTCGTCTTTAACTTTCTATTGCGTTTTCATCAGCTTCGGCCGTCTCACGTTCTTTCTCACGCTC
CTCCATGAGTTTATACATTGCCTTTTGGGTCCGCCTTTCGAGCTTGTCAAGCTTCTTCTGGACATCTCTTCGGAGGTCCCAGTTCG
GTTTCTTTGGAGCAATGTTGACAAATGGGTCCTCTTTCTTCTCCACAGCAGGTGGAAGTGCAGCGATTGGATCTTCGAGTTTGGGC
AGCTCTGGTGGTGCAACTTTACTGTTCTGAAGCTCCTCAGCTTGGGGAACATAATTTCTAAACTTCATGGCTGGACCATCTTCTTC
AACAGCAGCAGCAGCAGCATCACCTTCTCCCTCTTCTTTGCTCTCAGTAAGTTCCCGAGCTGCCCTTAAAGCTCTAAGCGCCTCTT
TGCGAGCAGCTGACTTCTGCTCTATCGATTCATCTTCACCACCCATTGATATTACTTCCTGGAAGCTCTGAGCTCTGAATTTTCTT
TCCCCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002882392 hypothetical protein ARALYDRAFT_477790 [Arabidopsis lyrata subsp. lyrata]6183e-062
NP_566245 coiled-coil domain-containing protein 12 [Arabidopsis thaliana]6112e-061
XP_002263894 PREDICTED: hypothetical protein isoform 2 [Vitis vinifera]4955e-048
XP_002305693 predicted protein [Populus trichocarpa]4741e-045
ACU16280 unknown [Glycine max]4104e-038

Swiss-Prot top hits (Blast detail)Scoree value
Q9UU80 Cell cycle control protein cwf181314e-007

TrEMBL top hits (Blast detail)Scoree value
Q9MAB2 At3g050706111e-061
B9H295 Predicted protein4741e-045
C6T3P2 Putative uncharacterized protein4103e-038
C6SY40 Putative uncharacterized protein4076e-038
B9S0R3 Putative uncharacterized protein3583e-032

Arabidopsis top hits (Blast detail)Scoree value
AT3G05070.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: mRNA splicing factor, Cwf18 (InterPro:IPR013169); Has 221 Blast hits to 221 proteins in 113 species: Archae - 0; Bacteria - 0; Metazoa - 107; Fungi - 54; Plants - 17; Viruses - 9; Other Eukaryotes - 34 (source: NCBI BLink).6224e-065

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
72  100%

Unigene MembersMember information