Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN40245

FASTA Sequence
Unigene ID: UN40245Length: 1021 SSR 
GGAAGGCTTTTCTTCTTCTTCTTCTTTCTTTTGGGGGTTAAGAAGCAAATGACGACGAACATCGGAATCATGGATAGTGCTTACTT
TGTCGGAAGAAACGAGATTCTGACTTGGATCAACGATCGCCTTCATCTCAATCTCTCTCGCGTGGAAGAGGCTGCATCTGGCGCTG
TTCAATGTCAGATGCTTGATGTGACCTTTCCTGGAGTTGTGCCAATGCACAAGGTTAATTTTGATGCAAAGAACGAATATGATATG
ATACAAAACTACAAGGTCCTGCAAGATGTGTTCAATAAGCTGAAAATTACAAAGCCATTGGAAATTAACAGGCTAGTCAAAGGCCG
ACCCCTGGATAACTTGGGTTTCTACAGTGGCTGAAACGTTTCTGTGATTCCATTAATGGTGGCATTATGAATGAGAACTATAATCC
AGTGGAAAGAAGATCAAAAGGTGGTAAAGAGAGGAGTGTAAAGGGATTTAATAAGATGCCCAACAATAATCATCATCCTCCACCCA
ATCCAGGGCAGTAGCCCAAGCCAGCAAAATATCTCAATTACAGGTTTTGTCGAAGGAGCTTGCAGATCTCAAGATCTCTTTTGACC
TCTTGGAAAGAGAAAGAGACTTTTACTTCTCCAAGCTCCGGGATGTAGAGTTACTTTGCCAAACTCCTCAAGTAGAGGATCTTCCT
ATAGTGGTAGCAGTGAAGAAGATACTGTATGCAACAGATGCAAATGAATCTGCACTAGAAGACGCTCAGGAGTTCTTAGACCAATC
CTTAGGTGTGGAAGCTGAAGATGAAGGTAACGGAGAACAAGAAGAAGATGAAGAAAAGACACAATCCTAAGCTCTGACTATTTATA
ATCCTAAGTTAGAAGACATTTTCGGATCAGTTTTTTTTTTTTTTCTAGAGTTGTTGAACAATGGCTTGGACATGGCCTTCTCTTCA
AAAGTTTCCTTTGTTAAAGGGACTTGGCGAAACGTGAAGATGAATGAGCTTTTCTATTAGAGAGCTTTAGTTTGA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_190353 microtubule end binding protein EB1A [Arabidopsis thaliana]5334e-052
ACB72542 microtubule plus-end binding protein [Brassica napus]5227e-051
XP_002875859 ATEB1A [Arabidopsis lyrata subsp. lyrata]5173e-050
BAC42296 putative microtubule-associated protein EB1 [Arabidopsis thaliana]5074e-049
NP_201056 microtubule-associated protein, RP/EB family [Arabidopsis thaliana]5074e-049

Swiss-Prot top hits (Blast detail)Scoree value
Q9UPY8 Microtubule-associated protein RP/EB family member 32392e-019
Q6PER3 Microtubule-associated protein RP/EB family member 32392e-019
Q5XIT1 Microtubule-associated protein RP/EB family member 32392e-019
Q8WQ86 Microtubule-associated protein RP/EB family member 12383e-019
Q6P848 Microtubule-associated protein RP/EB family member 12356e-019

TrEMBL top hits (Blast detail)Scoree value
Q7XJ60 At3g476905333e-052
B2LU37 Microtubule plus-end binding protein5225e-051
Q8GYG7 Putative microtubule-associated protein EB15073e-049
Q9FJJ5 Microtubule-associated protein EB1-like protein5073e-049
B9I2Z5 Predicted protein4868e-047

Arabidopsis top hits (Blast detail)Scoree value
AT3G47690.1 ATEB1A; microtubule binding5332e-054
AT5G62500.1 ATEB1B (END BINDING PROTEIN 1B); microtubule binding5072e-051
AT5G67270.1 ATEB1C (microtubule end binding protein 1); microtubule binding4382e-043

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  67%
 
91  33%

Unigene MembersMember information