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Information for unigene UN40270
| FASTA Sequence |
| Unigene ID: UN40270 | Length: 1245 |
SSR | | ACAAACATATTCTTTCTTTCTTCTTCTTCGTAAAATAAAATCAAATACGTAAAATTCGGGTTTGTCTATTCTCGAAAGACTGAAGC
GTGCGTCTTGATTCGTTTTGTTCTCCCACAAACCCTTATCTTCAGTAGTCTTCTCTCACTTTCCATTCTCCGCCACCACACAAACA
TATTCTTTCTTCTTCTTCTTCGTAATTTCGTATTTCATACTCTCTATTTATACAAACATTTCATTCGACCTTTCTCTATTCATTGC
CTCCTCCCAATACTTTCTCCAAAATATTATCTTTTTTTTCTTCTCATTCCAAAAAAAAAATCCTTCTTCTGGGTTCCTAAATTTGA
TTCACATTCATCTCGCCGTCTTTTTTTTCTTACCCTCATTGATTTGATTTATCTATTGAGTTTGTAGTTGAGGAAGTTTCCAATGG
CTCTTGCCTATGATCCTCTCTTCATTACATCCGACAAATCCCCCATTGATATCATCTCTCGCACCCAAAGCGAGAATCACACCACT
AGACCAAATGCCCTGTTTAATCGATTTGTTGTTTATTGTGTTGTGCTATTTATTTAGTCACCTAGACTCCTAGCTATCGTTATTGT
GGATAAGTTTAGTTCAGAAATTGTTAATTGGGCTATAAAAGTGAGAGATTAAAAAGCGAATTAAATCGACTAGGGTAAGAGTCATT
CTACCTGCTGATCGCCGCATATAAGCCAACTACTCCTCCGTCCCCAACCGTCTCTCTCTCTCGGCGTTCTTGGAGAAGCGAAGTAC
CTTCAAGAAGAAGGCACCAAAGGCAATCAAGGAGATAAGGAAGTTTGCAGAGAAGGCAATGGGGACAAAGGATGTGAGAGTCGATG
TGAAGCTGAACAAGCAGATTTGGAGCAGAGGTATCAGAGGTCCTCCTAGAAGGATCAGAGTCCGAGTTGCTCGTAAGAGAAACGAT
GACGAAGATGCAAAGGAAGAGTTCTTCTCCCTTGTCACTGTCGCTGAAATCCCCGCCGAAGGTCTCTCCGGTCTTGGCACTAAAGT
CATCGATGAAGAGGATTGAACAATCATTTTTGTAACCACTTTTTATCAGATTATTTCAAGTTTTGTTTACCTTTTCAACTTTGCAC
TGACGCAGTTATTGTGAGAACATTTATCTTCTTGAGGTCCTGATCCCATGTTCATGAAATAGACCATGTCATGAACAAAGTCTAAT
TCTTGGGTTATATCATAAATACTGATTCGATTTATGATTTG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_200482 60S ribosomal protein L31-3 [Arabidopsis thaliana] | 457 | 3e-043 |
| AAM62625 60S ribosomal protein L31 [Arabidopsis thaliana] | 456 | 5e-043 |
| XP_002866162 60S ribosomal protein L31 [Arabidopsis lyrata subsp. lyrata] | 452 | 1e-042 |
| XP_002869620 60S ribosomal protein L31 [Arabidopsis lyrata subsp. lyrata] | 451 | 2e-042 |
| NP_194353 60S ribosomal protein L31-2 [Arabidopsis thaliana] | 450 | 2e-042 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P51420 60S ribosomal protein L31-3 | 457 | 1e-044 |
| Q9STR1 60S ribosomal protein L31-2 | 450 | 1e-043 |
| Q9SLL7 60S ribosomal protein L31-1 | 439 | 2e-042 |
| P46290 60S ribosomal protein L31 | 412 | 2e-039 |
| Q9M573 60S ribosomal protein L31 | 400 | 6e-038 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q0WRN2 Putative ribosomal protein | 450 | 2e-042 |
| A1KXE2 Putative ribosomal protein L31 | 414 | 2e-038 |
| B9S6A5 60S ribosomal protein L31, putative | 414 | 2e-038 |
| B9RKC9 60S ribosomal protein L31, putative | 413 | 3e-038 |
| B6VC52 60S ribosomal protein L31 | 411 | 5e-038 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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