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Information for unigene UN40279

FASTA Sequence
Unigene ID: UN40279Length: 1255 SSR 
GGGAATAAAAATACTCATTTCATATAAGGGTCTTAATACCCAAACCAAGCATCCAACCAACATAAGGGGGCATAAAGAACATTACT
GACTAAAAAACTTGAAACAAACCATCAATGTAACTCATCATGAAGAGGAGGAGGATGCGTTGTTTTTGAATATCATCTTTGCAGTG
TAGTCCACGAGCGCAGTTCTCTGCAAACACAGCTCCATCTGCTTAGCCTTTAGCTTCTTCAGCTTCTCCTCCATCTCCCTCTTCTT
CCCTCCATCCTCAACCCTATCCCAAACCCCACTCACTGTAAACTCATCCAAGCCCATAACACTCACGTTCTCCTTCTTAAAGAACA
GCCCCATCTCTCTACTCTCCGAGAGATGATGAGTGTCCACAACAACAGCATTCACCACCTTCTGTGTTTTTTTCACCTCTACTACT
TCTTTCTTGGGCGTTGTCGAAACCAACTCATCCTCTTTCGACAACTTCTTCTTCCTCGGTTTAGCAGGAAGCACACCGTCGCTTCC
CCAAATCTTCCTCGACAACTCGAAGGCCTTCTGGTCAAGATCCTTAGCGCACGTGATCTTGTCTTCAGTCTTTCCTTTCTTGAGGG
CGTTCTTGACTATATTCGCAAACTTCTTCTTACACCTCTGGAGCTTGGTAACGATCTGAGCCTTGGAAGCGTTGAAGTCGATCAAG
GTCTTGACGTAATCGCAGAAGGCGTCCATGTTCTCGTAAGGGTCTCCTTTGGTGGAGGTGAAGTCGAGAAAGCCTTGAAGCATCGC
GATCTCGTCCGTCTCGCTGAACAGCCTCTGAAACAACATCTTCTTGGCTTCTTCTCCGGATATCTTCTTCTTGACATCTTCATCTT
TTGTTGTTGTTGTTGGCTTCTTCTTCTTCACTTGCTCAGTGGTCGATGATGTCTTTGCCTTCTTCTTAGACTCGTTGTCGTTATCC
TCTTGCTTCAGAGAACGCTTTGCTGCCGTGGAGCTCTCGGGTGGGATCGGTTTGGTCGCGACAGTGTTGAGAGGCTTGGTCTTGGT
CGCAGGCTCGGAATCTGAGTCGGATTCTGATTCGGATTCGCCTTCTTCAGAGTCGGATTCAGACTTCTTGGCAGCAGAAGCAGGAG
GAGGAGGAGCAGGTTTCTGAGTGAGTTTGGACTGGACATCTCCAGCTTCTTCATCGGAAGAGTCGGATTCTTCTCCTGATGAACCA
GACTCTTCTTCTTCCTCTTCACTGGAAGAGGCAACAGGAGGGTTCTCGATC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002869685 hypothetical protein ARALYDRAFT_914061 [Arabidopsis lyrata subsp. lyrata]8921e-093
NP_194251 DNA-binding storekeeper protein-related transcriptional regulator [Arabidopsis thaliana]8599e-090
AAK62441 putative protein [Arabidopsis thaliana]6643e-067
AAN65068 putative protein [Arabidopsis thaliana]6635e-067
NP_192035 DNA-binding storekeeper protein-related transcriptional regulator [Arabidopsis thaliana]3633e-032

Swiss-Prot top hits (Blast detail)Scoree value
P41777 Nucleolar and coiled-body phosphoprotein 11722e-011
P15771 Nucleolin1595e-010
Q14978 Nucleolar and coiled-body phosphoprotein 11533e-009
Q9P785 LisH domain-containing protein C1711.051381e-007
Q54RC3 DNA topoisomerase 11353e-007

TrEMBL top hits (Blast detail)Scoree value
Q9SB42 Putative uncharacterized protein AT4g252108596e-090
Q94F05 Putative uncharacterized protein F24A6.506642e-067
Q8H0X7 Putative uncharacterized protein At4g252106633e-067
O04608 A_IG002N01.32 protein3632e-032
O81314 F6N15.6 protein2378e-018

Arabidopsis top hits (Blast detail)Scoree value
AT4G25210.1 transcription regulator8593e-092
AT4G01260.1 transcription regulator3631e-034
AT4G00390.1 transcription regulator2771e-024
AT4G00130.1 INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF573 (InterPro:IPR007592); BEST Arabidopsis thaliana protein match is: transcription regulator (TAIR:AT4G25210.1); Has 54 Blast hits to 54 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).2251e-018
AT4G00610.1 DNA-binding storekeeper protein-related2179e-018

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
63  75%
 
211  25%

Unigene MembersMember information