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Information for unigene UN40300

FASTA Sequence
Unigene ID: UN40300Length: 961 SSR 
CTCAATGTCAATGCATTTGGCAGTGCCAAAAATGCGGAGATACTTAAAAATTGAACCAAATCCATAAAAGCAAAACAAGAGTAACA
TAATTTTTAAAAGAAGTAAAATCAGAGGGTTTGATCATAAACTTAAGAATCTAATAGTAAACCCTTAGCTAACAAACTTGAAAACA
ATAATTTCTGGAAGGAAGAGTGTCTTCTTCACTTCACATCTAGTGGCTTCGTTTCCTCCTTAACGGCGGCTTCATCTTTTTTGTCT
CCTGATTTTGCAGTTTCTTCCTCATCATCACTGTCTTCAAAATCTTCTATGCCTCCCATGCCGTCTCCCATTCCTCCCATACCTCC
CATGCCGCCAAGTCCTTCAAGTCCGGGCATTCCACCCATACCGCCAAGTCCACCCATACCACCAAGTCCTTCAAGGCCGGCCATTC
CGCCCATACCGCCCATACCGGCCAAGCTCGGGAAATCCATTCCGCCCATTCCTCCCATATCCATATCTCCAGCACCAGCGGTGCCT
TCATCGTCCTCATCTACCCACTTGTCCCAATCAATCTTGACATAGTGTGGCGCTTTCCCACCGCGGATTAGCTTGTTCCACCTTTC
CGGCTCTGCTTTCTCTATTATGCGGAAAGTGCTTCTCACTCCGATGTTGATTTTGCTTTCCTCAACGTTGACTTTGTCGTGAAGTT
CGAGTTTGAGTTCATAAACGTGGTTTTCAGGACCAGCTTTTGCCGAGAAATCAAAGACACCTTCAGGGAGAAGATTAACTTTAGTC
TCCTTGGAGTCAGCCAACACTACGGTGAGGAAAATCTTGTCAGTGGTCTCGGCCCACTTCGCTTCAGGATGACGACTCATGTTTAA
TGGACGAAGCTTGTAGAAGAAGAAGAAGAGGAGCCCTAGATAAGAGAGAAAGAACTCAAACGGTGACGCGAAGATTAGATTTGTGT
TTACTTGTTTTGATC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_192154 HSP20-like chaperone [Arabidopsis thaliana]8784e-092
NP_001154201 HSP20-like chaperone [Arabidopsis thaliana]8613e-090
AAC19287 T14P8.5 [Arabidopsis thaliana]8524e-089
XP_002892131 predicted protein [Arabidopsis lyrata subsp. lyrata]7654e-079
CAC16575 p23 co-chaperone [Arabidopsis thaliana]7556e-078

Swiss-Prot top hits (Blast detail)Scoree value
Q6YYB0 Uncharacterized protein Os08g03595006452e-066
P0C8Z0 Uncharacterized protein OsI_0279406263e-064
Q9NTZ6 RNA-binding protein 122061e-015
Q8SQ27 RNA-binding protein 122061e-015
Q8R4X3 RNA-binding protein 122061e-015

TrEMBL top hits (Blast detail)Scoree value
Q8L7U4 AT4g02450/T14P8_58782e-092
O81288 Putative uncharacterized protein AT4g024508523e-089
Q9FT78 P23 co-chaperone7554e-078
B7FF72 Putative uncharacterized protein (Fragment)6372e-064
C5YKA7 Putative uncharacterized protein Sb07g0151406013e-060

Arabidopsis top hits (Blast detail)Scoree value
AT4G02450.1 glycine-rich protein8781e-094
AT4G02450.2 glycine-rich protein8611e-092
AT1G49750.1 leucine-rich repeat family protein1621e-011
AT4G13340.1 leucine-rich repeat family protein / extensin family protein1567e-011

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  33%
 
124  67%

Unigene MembersMember information