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Information for unigene UN40311
| FASTA Sequence |
| Unigene ID: UN40311 | Length: 859 |
SSR | | AACTTCGATTATTGCAGTCTTCGACTTCCTTTTACCTTTCTCCTTCGTCTTCTCTCTCTCTCGAGATTCATGTAACACAAAAGATT
TGTGTAAACCCTCTCCATTGAAGATAATGGCGAAAACCAATGGAGTTATTATCCCGACGATAGACTTGGGGGAGGAGGTTTCATAC
AAGATCCTGAACCAGAAAATCCGCGAAGCCAGCGAGAGGTGGGGATGCTTCAGAGCGATCAACCATGGAGTTTCGCTGTCTTTGAT
GTCCGACATGAAGAAGACCGTTATCGATCTCTTCGAACGTCCGCATGAGGTGAAAGTGCGTAACGCAGACGTGTTACTAGGGAGTG
GTTACAGGGCTCCTAACGAAATTAATCCTTATTACGAAGCGTTGGGTCTCTACGACATGGCTTCTCCTCAAGCTGTCAACACCTTT
TGTGACCAGCTAGAGGCTTCTGCGGATCAAAGGGACATAATGGTAAAATATGCGAAAGCTATCGATGGACTTGCAAAGGATCTAGC
AAGGAGGTTAGCAGAGAGCTACGGCTTGGACGATACAAACTTCTTCGAAGGATGGCCGAGCCAGTTCCGGATCAACAAGTATCATT
TCCAACCAGAAACGGTCGGGAAACTCGGTGTCCAGTTACACACCGATTCAGGCTTCTTGACGATTCTTCAAGACGACGAAAACGTC
GGTGGGCTCGAAGCAATGGACAATTCTTCGGGAACGTTCTTTCCCATAAGCCCGTTGCCGAACACGCTTGCTATCAACCTCGGGGA
CATGGCTACGATCTGGAGCAATGGGAGTTGTGCAACGTGAAGCATAGAGTGCAGTGCACGAAGCGACGAGAGTTTCTATCGCTTC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_172865 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase-like protein [Arabidopsis thaliana] | 1064 | 8e-114 |
| XP_002892789 hypothetical protein ARALYDRAFT_471571 [Arabidopsis lyrata subsp. lyrata] | 1032 | 4e-110 |
| XP_002892788 hypothetical protein ARALYDRAFT_334706 [Arabidopsis lyrata subsp. lyrata] | 907 | 1e-095 |
| NP_172864 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase-like protein [Arabidopsis thaliana] | 890 | 1e-093 |
| XP_002298993 2-oxoglutarate-dependent dioxygenase [Populus trichocarpa] | 705 | 3e-072 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O49561 Gibberellin 2-beta-dioxygenase 8 | 238 | 2e-019 |
| Q9C5K7 1-aminocyclopropane-1-carboxylate oxidase homolog 2 | 225 | 7e-018 |
| Q84MB3 1-aminocyclopropane-1-carboxylate oxidase homolog 1 | 195 | 2e-014 |
| Q96323 Leucoanthocyanidin dioxygenase | 162 | 1e-010 |
| P40902 Sexual differentiation process protein isp7 | 153 | 2e-009 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9XI75 F7A19.21 protein | 1064 | 6e-114 |
| Q9XI76 Dioxygenase-like protein | 890 | 8e-094 |
| B9GJL0 2-oxoglutarate-dependent dioxygenase | 705 | 2e-072 |
| B9SRB9 Gibberellin 3-beta-dioxygenase, putative | 705 | 2e-072 |
| B9I0M2 2-oxoglutarate-dependent dioxygenase | 685 | 5e-070 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G14130.1 2-oxoglutarate-dependent dioxygenase, putative | 1064 | 3e-116 |
| AT1G14120.1 2-oxoglutarate-dependent dioxygenase, putative | 890 | 5e-096 |
| AT4G21200.1 GA2OX8 (GIBBERELLIN 2-OXIDASE 8); gibberellin 2-beta-dioxygenase | 238 | 2e-020 |
| AT1G03410.1 2A6; oxidoreductase | 231 | 1e-019 |
| AT1G06640.1 2-oxoglutarate-dependent dioxygenase, putative | 225 | 6e-019 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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