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Information for unigene UN40337
| FASTA Sequence |
| Unigene ID: UN40337 | Length: 803 |
SSR | | TTTTTATAAAACCCTACCTTTGAAAATCTCGACTCTCTCTCTCTTTCGCCGCCGACGACAGTAAAAATGGGTGCTAAGGCAAAAAA
AGCCCTGAAGAAGAACATGAAGAAGATCTCTGCTTCCGCTGCTACTTCTTCCTCATCTCAGCTAGCTATTCCCCAGAAACCCAAAC
CGTCAGCTGACTTTTTGCCACTAGAAGGCGGTCCAGCTCGAAAAGCTCCAGCGACCAAACCTATCGAGAACAAATCCACCGTGCTG
TACATCGGTCGCCTCCCTCACGGTTTCTACGAGACTGAGATTGAAGCTTTCTTCACACAGTTTGGAACAGTAAAGAGAGTCAGAGT
CGCACGAAACAAAAAGACTGGGAAATCAAAACATTTTGGATTCATTCAGTTTGAGGACCCTGAGGTGGCGGAGATTGCAGCGGGTG
CAATGAATGACTATCTGTTGCTCGAGCACATGCTTCAAGTCCGTGTTATTCCACCAGAGGATGTTAAACCTAATCTGTGGAAAGGT
TTTAAGTGCCAGTACAAACCAGTTGATTGGGTTCAGATCGAGCGTAAACAACACAACAAGGAAAGGACACTGGAAGAACATAGGAA
AATGCTGAACAAGTTGTGAAACGTGATCAGAAAAGAGAAAGAGAATCGAAGCTGCTGGAATAGAATATCATGCCCCGAGCTTGTTG
GAATACCAGCATACCTAGAGATCAAGTTTAGTGAGACTAGTTACTGGTTTGGATAGCTTTGTTTTGTATGTGGTATCTGGTTTTTG
TACTTTGACATCGGATCCAAACTCAAACT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002871104 RNA recognition motif-containing protein [Arabidopsis lyrata subsp. lyrata] | 846 | 1e-088 |
| NP_196080 RNA recognition motif-containing protein [Arabidopsis thaliana] | 826 | 3e-086 |
| XP_002316513 predicted protein [Populus trichocarpa] | 596 | 1e-059 |
| XP_002530883 poly-A binding protein, putative [Ricinus communis] | 596 | 1e-059 |
| ABB87134 RNA binding protein-like protein [Solanum tuberosum] | 590 | 6e-059 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O74978 Uncharacterized RNA-binding protein C1827.05c | 314 | 3e-028 |
| P53927 Ribosome biogenesis protein 15 | 279 | 3e-024 |
| Q3SZM1 MKI67 FHA domain-interacting nucleolar phosphoprotein | 267 | 8e-023 |
| Q6GL69 MKI67 FHA domain-interacting nucleolar phosphoprotein-like | 261 | 4e-022 |
| Q8JIY8 MKI67 FHA domain-interacting nucleolar phosphoprotein | 260 | 5e-022 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9LZ65 AT5g04600/T32M21_200 | 826 | 2e-086 |
| B9HW06 Predicted protein | 596 | 9e-060 |
| B9SY14 Poly-A binding protein, putative | 596 | 9e-060 |
| Q2VCH8 RNA binding protein-like protein | 590 | 4e-059 |
| C6TG27 Putative uncharacterized protein | 562 | 8e-056 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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