Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN40348

FASTA Sequence
Unigene ID: UN40348Length: 1253 SSR 
GGATCCAAAAACCAAGCACCAAGAAAACAAAACAAAAAAACAGAGAATAAAAATAAAAAGCCAATGATCAAAGGAAGAGATGGAAA
CAGAGGATCCTCTTCTTCTGGTTACTCTGCAGATTTGTTGGTATGTTTCCCTTCAAGAACCCACTTAGCTTTTGCACCTAAACCCA
TTTGCAGCCCATCTCGTCCTTCCATCTCCACCAACCGTCGTCCACACCACCGTCGCCAACTCAGCAAACTCTCAAACGGAGGAGGA
GGACACGGGAGTCCTGCTCTGTGGGCTAAACAAGCAAGTAGTAAGAACATGGGTAATGACGAAACAGCCGAGCCCACTTCTCCTAA
AGTTACTTGCGCCGGTCAGATCAAAGTCCGGCCGAGAAAATGCGGCGGGAAAGGAAAGAACTGGCGGTCTGTGATGGAGGAGATAG
AGAGGATACATAGCAGCAACAAGTCGCAGAGCAAGTTTCTTGGACTAAAGAAAGATGTGATGGGTTTCTTGGCTTGTCTAAGGAAC
ATCAAGTTCGATATCAGGTGTTTTGGTGATTTCAGACATGCTACTGATGTCACTAGCGACGACGAGGAAGAAGAGGAAGATGATGA
AGAGGAACAAAAGACTGTTTTCTCCAAATGGTTTATGGTTTTACAAGAGGAAGAACAAAGCACTAACGACGACAACAAGAACAACA
AGAAGTGCGTGGTTGATGAAAACGCGCTTTTGCTGATGAGGTGTAGATCGGCTCCATCGAAGAGTTGGTTAGAAGAGAGGATGCAA
GTGAAAACAGAGCATGGAAACAGAGAAGAAGAAGAAGAAACAGAGGATCAAGAGATGAGTGTGAATAAGAAGAAGAATAAGAAGGA
TTTGGGATCACTAATGGAGGAAGAGAATATGGAACTAGTGTTGATGAGATACGATACTGATTATTACAGACTCTCTTCAGACATAG
CTAAGGAGACTTGGGTTGTCGGAGGAATTAATCAAGATCCTCTGTCTCGTAGTCGAAGCTGGAAAAGCTAATATTTCTCACTATTA
ATCATCGTATTTTAAAGATATGATTAAGATTTTTTATACTATCATTTAGATTTTGTGTTTATTAATTTTGGTACTTGTTTTCACTT
TTTTTCTTTGGTTTCTTGAGTTTCTAGGGTTACTCTGTTTCGTATCTCAAAAGGTTTGTTTTTACTTTGTTTCAGTGTGTTTTTTT
TCATCACGACGTGTGTAACGTAACGTAAATATGTACATGGTCTTTTATC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002887722 hypothetical protein ARALYDRAFT_476978 [Arabidopsis lyrata subsp. lyrata]12925e-140
NP_177935 uncharacterized protein [Arabidopsis thaliana]12853e-139
BAD94415 hypothetical protein [Arabidopsis thaliana]9126e-096
XP_002890501 hypothetical protein ARALYDRAFT_472459 [Arabidopsis lyrata subsp. lyrata]8231e-085
NP_173642 uncharacterized protein [Arabidopsis thaliana]8052e-083

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9C9S1 At1g7811012852e-139
Q56WT3 Putative uncharacterized protein At1g781109124e-096
Q5XVK1 Putative uncharacterized protein8051e-083
Q9LM19 F16L1.4 protein7583e-078
B9GUL6 Predicted protein4635e-044

Arabidopsis top hits (Blast detail)Scoree value
AT1G78110.1 unknown protein12861e-141
AT1G22230.1 unknown protein8064e-086

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
64  100%

Unigene MembersMember information