 |
Information for unigene UN40355
| FASTA Sequence |
| Unigene ID: UN40355 | Length: 782 |
SSR | | CAATATGTTTGAAGAAGCAACCATAATTTTTTAACAAGAATAACCAAAACAACGATGGATAGAAGTTAGACTTTTCTTTTTTATCA
CATTTTAGAAAAGGTACCTAAAAAGCATAGTAGTAAATTATTATTCCCAGTTTTTTTAGAGAGGATCCAAATCTAGAAAACCCTAG
GCCGAACCACCGTTCGCCGCCGCGGATCCGTTGTTGCTGCTGTTGTTAGCGAGGGAGGACGACGTCATCATCTTCTGAAACTCCTC
GAAGTTGACATTCCCGTCGCCGTCAGCATCCACGGGGCCGATCATCCGAGCGCAGTCCTCCACGGAGCACGGCATCCCCAAACGGT
TAAGCACCTTGTGGAGCTCGGCGGCGGAGATGAGCCCGTTCTTGTCCTCGTCGTACAGATCGAAGGCGTCGCGGATCTCGGACGCG
GAGGAGGAGGAGCGGCAGAGGGCGGAGAACTCGTCCACGTTGATGAAGCCGTCGCGATCGGTGTCGACCTCCTCCAGGACGCGGTT
GAGCTCCGTCTCCGTGTAGGAAGTCCCCATGGCCTTGAAAACGCCTCCGAGCTCGGTCACCGAGATCTTGCCGTCGCCGTTGGAGC
CGAACTGGTCGAAAACCTTCTTGAGCTCCTCGGGATTCGCCATGTCAACCACCGGTGCTGGTGGTGGCGTGGGTTTGGCGGTTTCG
GGATGAGCGCTTGCCATTTTTCTTTTTTTTTCTGTTAGAGGTAAAAGTTAGAGAGAGAGAGAAAATTAGTTGGAGGGCTCTGCTTT
GTGGCTCC
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_173259 putative calcium-binding protein CML27 [Arabidopsis thaliana] | 736 | 7e-076 |
| XP_002892987 hypothetical protein ARALYDRAFT_889234 [Arabidopsis lyrata subsp. lyrata] | 735 | 9e-076 |
| XP_002887495 hypothetical protein ARALYDRAFT_476499 [Arabidopsis lyrata subsp. lyrata] | 591 | 5e-059 |
| NP_177504 putative calcium-binding protein CML26 [Arabidopsis thaliana] | 566 | 4e-056 |
| AAM67075 putative calmodulin [Arabidopsis thaliana] | 558 | 3e-055 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LE22 Probable calcium-binding protein CML27 | 736 | 3e-077 |
| Q9C9U8 Probable calcium-binding protein CML26 | 566 | 2e-057 |
| Q9M7R0 Calcium-binding allergen Ole e 8 | 416 | 4e-040 |
| Q9C8Y1 Probable calcium-binding protein CML23 | 350 | 2e-032 |
| Q8RZB5 Probable calcium-binding protein CML10 | 337 | 6e-031 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9IEB3 Predicted protein | 491 | 1e-047 |
| Q93YA8 Calcium binding protein | 468 | 6e-045 |
| B9I2F7 Predicted protein (Fragment) | 467 | 8e-045 |
| A5ATQ5 Putative uncharacterized protein | 434 | 5e-041 |
| C6T2C2 Putative uncharacterized protein | 428 | 3e-040 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G18210.1 calcium-binding protein, putative | 736 | 3e-078 |
| AT1G18210.2 calcium-binding protein, putative | 736 | 3e-078 |
| AT1G73630.1 calcium-binding protein, putative | 566 | 2e-058 |
| AT1G66400.1 calmodulin-related protein, putative | 350 | 2e-033 |
| AT1G24620.1 polcalcin, putative / calcium-binding pollen allergen, putative | 334 | 1e-031 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
