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Information for unigene UN40359

FASTA Sequence
Unigene ID: UN40359Length: 1074 SSR 
GGAGAGAAAGGAAAAAAGGGGAAAATTTCGAAATCTTGTTGTCCATATCTCTCTCAATTTGGATTGGCTTTCTTCTTCGGATATCG
GCTCTTAGCGTTCGCTGGGTTTTGCAATCGAGATCCCTCTTCCATCTCCAATCGAAGCTTTTGGCTTTGAATTGGATTTTTGGGTT
TCGGTTTCAAATCCAGCTCCTTTGTGAGAAACCAGGAGAGATGCAGGACCAGCTGGTATGTCATGGCTGTAGAAATACATTGGTCT
ATCCTAGAGGAGCTACCAACGTTCGTTGTGCCTTATGTAACACTATCAACATGGTCCCTCTTCATCCTCATCCTCCTCCTCCTCCT
CATCATCATCATGCTCATGTAGGGATGGACATGGCTCACATTGTATGTGGTGGTTGTCGTACAATGCTTATGTATACTCGTGGGGC
GAATAGTGTAAGATGCTCTTGCTGTCAGACTGTAAACCTTGTCCCAGCAACCCCACCCGCACACGCCAATCAGCCTGCGCATATCA
GCTGTGGGAACTGTCGAACAACCCTCATGTATCCTTACGGTGCACCATCTGTTAGATGCGCTGTTTGCCAGTTCGTTACTAACGTT
AATATGGGCAATGGAAGGGTGCCTTTCCCAACTAACCTGCCAAATGGAACAACAGCCGCTCCTGGTTCAATGCCCCCCTCTACATC
CACTCAGTCAACACCACCGTTTCAGACCCAAACCGTCGTCGTAGAAAACCCCATGTCTGTTAACGAAAGTGGAAAGTTGGTGAGCA
ATGTTGTGGTTGGAGTGACAACAGAAAAGAAATAACCCACAAGATATTTCAGTCTCTATCCCTGCGTTTGGTTTGTGCATATTACA
TACGCGGAAAAGTGACTGTTTTATGTTATATCCTTGACTCCTTTTTTTTTTAACCCCCAAGAAAAAAAAAGGCTTTCAGAATCTCT
TGTTTTGTTTTTTTCTTCTTTCAAAGTTGATGAACACAAAGGTTTTTGGTCCAACAATCTGCCATTCCTATTTGTAGACTATGTAA
ACTTTATTGGCCCTTTGTGCCATTGTTAATCTATGTATTCAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAL50982 zinc finger protein LSD2 [Brassica oleracea]9582e-101
AAL50981 zinc finger protein LSD1 [Brassica oleracea]8911e-093
ADK63407 zinc finger protein [Brassica rapa]8883e-093
NP_849549 zinc finger protein LSD1 [Arabidopsis thaliana]7754e-080
XP_002869934 hypothetical protein ARALYDRAFT_492829 [Arabidopsis lyrata subsp. lyrata]6949e-071

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q8W194 Zinc finger protein LSD29582e-101
Q8W195 Zinc finger protein LSD18919e-094
P94077 Zinc-finger protein Lsd17852e-081
Q8RXL2 Putative zinc-finger protein Lsd17807e-081
C0Z316 AT4G20380 protein7351e-075

Arabidopsis top hits (Blast detail)Scoree value
AT4G20380.2 zinc finger protein (LSD1)7868e-084
AT4G20380.1 zinc finger protein (LSD1)7813e-083
AT4G20380.7 zinc finger protein (LSD1)7804e-083
AT4G20380.3 zinc finger protein (LSD1)7751e-082
AT4G20380.4 zinc finger protein (LSD1)7751e-082

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
63  100%

Unigene MembersMember information