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Information for unigene UN40370
| FASTA Sequence |
| Unigene ID: UN40370 | Length: 1096 |
SSR | | GGATCTGTCCCGTCCTCTCTCTCTCTCGAGCTCGGTCGGAAATGGCAGATTCGACGAGAAACCTGACTGGCCTCGGAGGACAAGCA
TCGAAACACGAAGAAGAAGAAGAAGGAGAAGAGAACGATGATTACATGGGAGACTTATCTCAGTTCATTCCACCTGAACTTACCCA
GAAATCTAAAAGAAAGGAATCTGAAAAGAAAAGTGTAGCCGTTGAAGCATCTCGTAATAAGCTAAAGAATCTCCCTTGGCACGAGC
GGCGAAGATTGGAGAAAGAGAGGAAGCAAATAGAAGAGGATGCACAGACATTGGCTCGTATTGAAGACACTCCCATTGGAGAGTCT
AACGTAGGGTTTAAGCTGTTGAAGCAAATGGGTTACAAGCCAGGCTCTGCTCTTGGCAAGGGAGGTTCAGGTAGAGCCGAGCCAGT
GACCGTGGATATTCGAAGATCCAGGGCCGGTGTGGGGAGAGAGGATCCACACAAGGAGAAGAGGAAGAGAGAGGAGGTTGAGGCGG
AGAATGAGAAGAGGAAAGTTGAGGAAATGTTGGAGGATTTTGGGGATAGGCAGAAGTCTCAGTGGCGTAACAAAAGAGTTGTGATT
AATTTTAGGAAGGCTAAGGCGGCTCTTGATCAGCTTGAGAATGTTGAAGTTGTTCCGGAGAAGAAGAAGGAGGGAGATGAAGATGG
TAAGGCTGATGAAGAAGAGGAGGAAGAAGAGGAGGTGATCACTGAAGAGGATTTGCAGGAGATATTAATGAAACTGAGGGATGAAC
ATCGGTATTGCCCTTTTTGCGGTTTTCAGTATGAAACGAGTGAAGCTCTTCTTTCCAATTGCCCTGGCGTTAATGAGGATGATCAT
TAGATAAGTCATACAGTGCATAAGGTTTGAATCAGGTTCAAAGTTCACTCGTTATGTGGCTGGAGAGGAAGCAAGAATCAGAAGAA
AAACACTGTTTAAGCAGGTAGGTGAAGAGATCAACTCTAAAGGAATTGCTAGTGGCCATATTACTCATATCCTTTCATAGATAGTA
GGGTGATAAAAAAGGATGCAAAACTCTGATTTGATGTTAGATGTTTTAATGTGATTCTTAAGCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002876444 hypothetical protein ARALYDRAFT_486242 [Arabidopsis lyrata subsp. lyrata] | 1167 | 1e-125 |
| NP_191350 D111/G-patch domain-containing protein [Arabidopsis thaliana] | 1143 | 8e-123 |
| XP_002532342 nucleic acid binding protein, putative [Ricinus communis] | 859 | 7e-090 |
| ACU24030 unknown [Glycine max] | 831 | 1e-086 |
| XP_002275225 PREDICTED: hypothetical protein [Vitis vinifera] | 791 | 5e-082 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q3UFS4 Coiled-coil domain-containing protein 75 | 299 | 3e-026 |
| Q8N954 Coiled-coil domain-containing protein 75 | 297 | 4e-026 |
| Q6DF57 Coiled-coil domain-containing protein 75 | 297 | 4e-026 |
| Q6DGZ0 Coiled-coil domain-containing protein 75 | 240 | 2e-019 |
| Q2KI19 Coiled-coil domain-containing protein 75 | 199 | 1e-014 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9M2Q7 At3g57910 | 1143 | 6e-123 |
| B9T273 Nucleic acid binding protein, putative | 859 | 5e-090 |
| C6TM88 Putative uncharacterized protein | 831 | 8e-087 |
| A5BSD5 Putative uncharacterized protein | 711 | 7e-073 |
| Q7EXZ3 Os08g0509500 protein | 592 | 4e-059 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G57910.1 D111/G-patch domain-containing protein | 1182 | 9e-130 |
| AT3G54230.1 nucleic acid binding / nucleotide binding / zinc ion binding | 117 | 3e-006 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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