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Information for unigene UN40374

FASTA Sequence
Unigene ID: UN40374Length: 1324 SSR 
ACTTCTTACTACTTCTCTCTCTCTCTCTACCGAAACCTCCCAAATTATAACTCTTACGTGATTGTAGAGTTTTCCGTATCCTCTCT
TAGAGATGCAAGATATTCATGATTACTCCATGACCGGAGGCGGTGGAAGCGGAGGAAGTACAGGGAGGTTTTATGGGGGAGGAATC
GGCGGCGGCGGAGGAGGAGGGGGAGATCGGAGGATGAGAACGCATCAGAACAGTATCCTCAACCATCACCAATCTCTCAAGTGTCC
TCGTTGCAGCTCTCTTAACACAAAATTCTGTTACTACAACAACTACAATCTCTCTCAGCCTCGACACTTTTGCAAAAACTGCCGTC
GTTACTGGACCAAAGGCGGCGTTCTCCGTAACGTCCCCGTCGGAGGCGGTTGCCGGAAAGCCAAAAGATCGAAGTCTAAGCAGCCT
ACGTCGTCGTCTCCTTCCTCTGCCGACATACCAACCACTCAAAACGTTGAAGAGAAATCAAGTAGCAGCGAGAGCTCTTCTCTTAC
CGCCTCTAACTCCACCGTCACCGCCTCTAACGCTACTGTCACCGCCGTCGCCGTCACCGCCACGGTTGCGTCGTCATCGGGTGTTA
TGGACACTGATATGCCTAATCTCAAACAGTACGGAAACGGGATCGAATGGTCGACGTTGCTCGGACAGGGTTCATCGGACGGTGGG
GCTTTCTCGGAGATCGGCTGTTTTACCGCGGCGTCGACGGTTGAAACAACTCCGTTTGGACTCGGGGGTACTTTCGTAAATCAACA
GTCTATAGCTGATCATCTGAAGTTGGAAGGTAATACTTTACCTCAGCAATTTGGTGATCCAACGGCTCAGGTTGATCCTAATATGG
GATTTGAACCGCTGGATTGGGGAAGTGGAGGAGGAGATCAAACACTCTTTGATCTAACCAGTTCAGTTGATCATGCATACTGGAGT
CAAAGTCAATGGGCGTCGTCTGATCAAGATCAGAATGGTCTCTACCTACCTTAATTCTCACAGCTTCTTCTTAACAAAAGTAATAA
TATATATTATACACATAAGGTAAAGTTTGATGATGTTGGTTTATATATATTTTTTATTTTACGTAATGGGTTGAAAACGGGATTTA
TTATATATAATATATATGACTGCTTGTAAATTTTTTTCTCTAAATATAAAATTTACCTCTTGTTTCCTAGTTTTTGGAATATCCCA
AGAGTGGAGTTTTATGTGGCATATTGGTTTTAATTTGGCTTTGGTTTACTTATCGTTGTATATTTGATAAGATTTAAATTTTGCTG
TGATTTTATTTCTTTCTTATTATTATTGCTGGTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ34224 unnamed protein product [Thellungiella halophila]13203e-143
XP_002864708 hypothetical protein ARALYDRAFT_919324 [Arabidopsis lyrata subsp. lyrata]11895e-128
NP_200893 Dof zinc finger protein DOF5.4 [Arabidopsis thaliana]11797e-127
BAE99282 zinc finger protein OBP4 - like [Arabidopsis thaliana]11762e-126
AAM63069 zinc finger protein OBP4-like [Arabidopsis thaliana]11431e-122

Swiss-Prot top hits (Blast detail)Scoree value
Q8LDR0 Dof zinc finger protein DOF5.411892e-129
O80928 Dof zinc finger protein DOF2.43381e-030
Q9LSL6 Dof zinc finger protein DOF5.73138e-028
Q9ZV33 Dof zinc finger protein DOF2.23111e-027
Q94AR6 Dof zinc finger protein DOF3.13102e-027

TrEMBL top hits (Blast detail)Scoree value
Q0WUB6 Zinc finger protein OBP4-like11761e-126
A9PI21 F-box family protein4941e-047
B9I2T1 F-box family protein4814e-046
B9RLI3 Putative uncharacterized protein4691e-044
Q0GLE8 Dof44627e-044

Arabidopsis top hits (Blast detail)Scoree value
AT5G60850.1 OBP4; DNA binding / transcription factor11901e-130
AT2G37590.1 Dof-type zinc finger domain-containing protein3389e-032
AT5G65590.1 Dof-type zinc finger domain-containing protein3137e-029
AT2G28810.1 Dof-type zinc finger domain-containing protein3111e-028
AT3G21270.1 ADOF2; DNA binding / transcription factor3102e-028

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
211  25%
 
192  50%
 
201  25%

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