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Information for unigene UN40395

FASTA Sequence
Unigene ID: UN40395Length: 898 SSR 
CTAAGAAATTCACACTACATGTATTTAAAAAGATTTTGAAGTTTATACAATTTAGCTGTAGAGTTTAGAGAATTCCTTCTAATGCA
AAGCCCTAATCTCACTCAATTGTTTGCTTAATACATAAGCTTCACAAGTTCAGGAAATATCACACTCCAAATATTAAAACTACAGA
ATAACTCACAAACAAAACAAGAAAACAGAAAAAGAAACATCAACATTAGAACTGCAATGCAAAGATCAAGATCAAATGTTCTTGTT
CTGTAAACAACAATATGTACGCATTGTAGATTTCTCCGTGTTTATTCGGACCGTACTCTATCCAATCTATCAACACTCTTCCTTCC
TCTCTCAATCTCATGATTATTCTGATGATGATGATGATGACTATAGTGGTCAACGCTCTTCCTCGCCTTGTCATGGAGGTCAACGC
TCCTCCTCGACCGGTCCAAATGCTGCTCGAAAGTGATTCTCAGCTTACTCTTCTTGGACTGACCCTTGGGAGGTTTCTCTTTCTCC
CTTCTGTCGACGCTCTGTCTTGGTTTCTCTCTTCTATCAACGCTCTGCCTCGGCATCTCGACATCGCTGCTCTGGTTTTCCGATTG
GTGGCACGTGCTCTTCCTAGAGGAGAGAGACCTCTCTACGGTTGTGATAAACTTCTTTAGGTGTTTGATGTATTCAGGGTACTGTT
CTAGATCACAGTGGTTACCACCTTCGAGCCAAAGCGGTTCGTACTTGTCTTTAGAGAGTTCCCATAACTGTTTCCCGTGGGAACAG
TCAACAACTTCATCACTAGTTCCCTACAACAAATATGAATAAACATAGAGAAAGAGTTAAAGACAAGATCAAGAACTCAAAAAAAA
AAAAGAGAGACAGAGAAATGGATATATTATTGGAGTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002873663 hypothetical protein ARALYDRAFT_488279 [Arabidopsis lyrata subsp. lyrata]7466e-077
NP_196943 alpha/beta-hydrolasefamily protein [Arabidopsis thaliana]7369e-076
XP_002269274 PREDICTED: hypothetical protein [Vitis vinifera]4851e-046
NP_186818 alpha/beta-hydrolase domain-containing protein [Arabidopsis thaliana]4796e-046
XP_002884265 hypothetical protein ARALYDRAFT_477346 [Arabidopsis lyrata subsp. lyrata]4609e-044

Swiss-Prot top hits (Blast detail)Scoree value
Q6DEY3 Abhydrolase domain-containing protein FAM108B11478e-009
Q7ZVZ7 Abhydrolase domain-containing protein FAM108C11478e-009
Q2HJ19 Abhydrolase domain-containing protein FAM108A1442e-008
Q99JW1 Abhydrolase domain-containing protein FAM108A1442e-008
Q5XIJ5 Abhydrolase domain-containing protein FAM108A1442e-008

TrEMBL top hits (Blast detail)Scoree value
Q9LY90 Putative uncharacterized protein At5g143907366e-076
Q9S7U7 At3g016904794e-046
B9RAQ5 Protein bem46, putative4571e-043
B9I3J3 Predicted protein4454e-042
B9P6N8 Predicted protein (Fragment)4454e-042

Arabidopsis top hits (Blast detail)Scoree value
AT5G14390.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01690.1); Has 2904 Blast hits to 2898 proteins in 507 species: Archae - 0; Bacteria - 766; Metazoa - 578; Fungi - 129; Plants - 154; Viruses - 6; Other Eukaryotes - 1271 (source: NCBI BLink).7517e-080
AT3G01690.1 EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G14390.1); Has 2954 Blast hits to 2948 proteins in 496 species: Archae - 2; Bacteria - 741; Metazoa - 618; Fungi - 134; Plants - 170; Viruses - 6; Other Eukaryotes - 1283 (source: NCBI BLink).4792e-048
AT4G24760.1 unknown protein3672e-035
AT3G30380.1 INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01690.1); Has 3127 Blast hits to 3124 proteins in 513 species: Archae - 3; Bacteria - 775; Metazoa - 627; Fungi - 135; Plants - 158; Viruses - 6; Other Eukaryotes - 1423 (source: NCBI BLink).3011e-027
AT3G30380.2 INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01690.1).3011e-027

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  67%
 
211  33%

Unigene MembersMember information