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Information for unigene UN40432

FASTA Sequence
Unigene ID: UN40432Length: 732 SSR 
GGACCATCACCACTACATACATACACAGCCTCCTCTTCGATCTCTCTCTCTCAAAAAAGAAAGGAAATGGCTAACCCTAGAGTTTA
CTTCGACATGGCTCTCGACGGAACCCCCGCTGGCCGCATCGTGATGGAGCTTTTCAAAGACACGACGCCGGACACCGCGGAGAATT
TCCGAGCCCTTTGCACCGGAGAGAAAGGAGTCGGGAGGATGGGGAAGCCGCTCCACTACAAGGGATCTTCCTTCCACCGCGTGATC
CCGGGGTTCATGTGCCAAGGAGGCGATTTCACCGCCGGGAACGGGACCGGCGGGGAGTCGATCTACGGAGCCAAGTTCAAGGACGA
GAACTTTGTGAAGAAGCACACCGGGGCTGGGATCCTCTCCATGGCGAACTCTGGTCCCAACACCAACGGATTTCAGTTTTTTTATT
TGCACCGCGGAGACGTCGTGGCTTGATGGGAAGCACGTGGTGTTTGGGAAGGTCGTTGAAGGTATCGAGGTTGTGAAGGCGATCGA
GAAGGTTGGATCGTCTTCCGGGACGACGAAGAAGAAGGTGGTTGTTGCTGATTGTGGTCAGCTTGCTTAGATCTCTGTGTGTGGGG
AGGGGAGGTCTTTTGAATCTGATTGAATAATGTTATCTTTTGCTTTTGAATGTTTCTCTTCTTCGAGTTTGTAAAACCCTCAGGGG
GTTTTGGATTTGACTATCTATGAATAATTATGAGCTTTTTAACC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAD22975 cyclophilin [Solanum tuberosum]5843e-058
XP_002869121 hypothetical protein ARALYDRAFT_491169 [Arabidopsis lyrata subsp. lyrata]5808e-058
ABK34279 cyclophilin [Solanum sogarandinum]5791e-057
NP_195213 Peptidyl-prolyl cis-trans isomerase CYP18-4 [Arabidopsis thaliana]5762e-057
P21568 RecName: Full=Peptidyl-prolyl cis-trans isomerase; Short=PPIase; AltName: Full=Cyclophilin; AltName: Full=Cyclosporin A-binding protein; AltName: Full=Rotamase5753e-057

Swiss-Prot top hits (Blast detail)Scoree value
Q42406 Peptidyl-prolyl cis-trans isomerase CYP18-45761e-058
P21568 Peptidyl-prolyl cis-trans isomerase5751e-058
Q39613 Peptidyl-prolyl cis-trans isomerase5689e-058
Q38900 Peptidyl-prolyl cis-trans isomerase CYP19-15491e-055
Q8W171 Peptidyl-prolyl cis-trans isomerase 15491e-055

TrEMBL top hits (Blast detail)Scoree value
Q9XF12 Peptidyl-prolyl cis-trans isomerase5842e-058
A0MTQ0 Peptidyl-prolyl cis-trans isomerase5797e-058
Q0WRR9 Peptidyl-prolyl cis-trans isomerase5762e-057
B8LFH7 Peptidyl-prolyl cis-trans isomerase5743e-057
A9P7Y6 Peptidyl-prolyl cis-trans isomerase5708e-057

Arabidopsis top hits (Blast detail)Scoree value
AT4G34870.1 ROC5 (ROTAMASE CYCLOPHILIN 5); peptidyl-prolyl cis-trans isomerase5761e-059
AT2G16600.1 ROC3; peptidyl-prolyl cis-trans isomerase5491e-056
AT4G38740.1 ROC1 (ROTAMASE CYP 1); peptidyl-prolyl cis-trans isomerase5364e-055
AT2G21130.1 peptidyl-prolyl cis-trans isomerase / cyclophilin (CYP2) / rotamase5293e-054
AT3G56070.1 ROC2 (ROTAMASE CYCLOPHILIN 2); cyclosporin A binding / peptidyl-prolyl cis-trans isomerase5132e-052

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
123  75%
 
111  25%

Unigene MembersMember information