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Information for unigene UN40448
| FASTA Sequence |
| Unigene ID: UN40448 | Length: 1006 |
SSR | | GGGAGAGAACAAAGACCATGTCAAGTGTTGAAACTTTAAAAGATTTTATATGTATGTGTGTATGAAAGAAAGAAAGAGTGAATGGA
GCTGTGGACAGAAGCTAGAGCCCTAAAGGCAAGTCTAAGAGGAGAAGCTATCAAACATCAAGTGGTTGTGTCTGAGGAACTAAGCC
GAACTTCTTCTGCTGAAGATTTCTCTGTTGAGTGTTTCCTCGATTTCTCAGAAGAAGTTCAAGAAGAAGAAGAAGAACTTGTCTCT
GTTTCTTCATCACACGAAGAACAAGAACAAGATTGTTGTATCTTTAGTTCACAACCTTGCATCTTTGACCAACTTCCTGCTTTCCC
GGTTGAAGATGTGGAAGAGCTTGAATGGGTATCTCGTGTTGTTGATGATTGTTCATCACAAGAAGTCTCACTTCTCTTAACACAAA
CCCACAAAACCAAACCAAGCTTCTCATCTCGAATTCCGGTTAAACCAAGAACCAAACGGCCTCGGAACAGCTTAACCGGCGACAGG
GTCTGGCCACTCGTTTCAACCAACCAACATGCAGCAGGAGAGCAGCAGTGGAAGAAGAAGAAGAAGAAACAAGAACTAGCGGTTGT
CTTCCAACGAAGATGCAGCCATTGTGGGACAAACACCACACCTCAGTGGAGAACCGGTCCGGTCGGTCCAAAAACCTTATGTAACG
CCTGTGGAGTTCGCTTCAAGTCAGGTAGGCTATGTCCCGAATACAGACCGGCGGATAGTCCGACGTTCTCTAATGAGATTCACTCA
AACCTTCATAGGAAGGTTCTGGAATTAAGAAAGAGTAAAGAGTTGGTTGAAGGAACAGGTGAAGCTATTACTAAATCAGACCAAGT
CAAATTCGGCAGCCAAGTGGTAGAGAAGACTTAGGTAAAATGTAAACCTACTTTTTTAGCATTATCTCTAGTGTTGTGTAATTTAA
CAACTTGCTTCATTACATTGGAAGCTGTTTTGGAACTAGTTTATAAAAAAATGTTTTCTC
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| GenBank top hits (Blast detail) | Score | e value |
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| BAJ33857 unnamed protein product [Thellungiella halophila] | 1188 | 4e-128 |
| NP_195194 GATA transcription factor 3 [Arabidopsis thaliana] | 1115 | 1e-119 |
| XP_002869130 hypothetical protein ARALYDRAFT_491187 [Arabidopsis lyrata subsp. lyrata] | 1115 | 1e-119 |
| AAM20641 GATA transcription factor 3 [Arabidopsis thaliana] | 1111 | 4e-119 |
| ACU18846 unknown [Glycine max] | 355 | 2e-031 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8L4M6 GATA transcription factor 3 | 1115 | 6e-121 |
| O49743 GATA transcription factor 4 | 385 | 2e-036 |
| Q8LAU9 GATA transcription factor 1 | 342 | 2e-031 |
| O65515 GATA transcription factor 7 | 326 | 2e-029 |
| Q9SD38 GATA transcription factor 6 | 312 | 7e-028 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9DGI2 AT4G34680 protein | 1115 | 9e-120 |
| B9GGL7 Predicted protein (Fragment) | 357 | 7e-032 |
| C6TAJ4 Putative uncharacterized protein | 355 | 1e-031 |
| Q76DY1 AG-motif binding protein-3 | 351 | 3e-031 |
| Q2HIT4 At3g24050 | 342 | 4e-030 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G34680.1 GATA transcription factor 3, putative (GATA-3) | 1115 | 5e-122 |
| AT4G34680.2 GATA transcription factor 3, putative (GATA-3) | 1115 | 5e-122 |
| AT3G60530.1 zinc finger (GATA type) family protein | 385 | 2e-037 |
| AT3G24050.1 GATA transcription factor 1 (GATA-1) | 342 | 2e-032 |
| AT4G36240.1 zinc finger (GATA type) family protein | 326 | 2e-030 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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