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Information for unigene UN40456

FASTA Sequence
Unigene ID: UN40456Length: 924 SSR 
GGGTGCCAACTAAAAACAGACGAAAGCATCTCGGCGGAACAACGAGGGAGAGAGAGAAGAGAGAAAGGCTTTTTCTTCTTCGCCTC
GATCTCAGGACTTCCTTCCATGAACCGTCTGCATCTGCATTTGAAGATTTAAAAACGGTTCTTGAAATGATGACTGTTCCTCAAAG
ATTCTCAACTAGGTAACGAGCGTTTCGCGGATCCAATGTGGAGCTTTGCGTCAAACGTGATTGGCAGCATAGGTGGTCTAAAGAAA
GACCACCCTCCTCCTCCTCAACCCTCTTGCTCAGACGACGACGAGGTTTCTAACGTTAGCAGGGACGAAGACGAGGAGGAAGAAGA
AGAGCAAGGACTAGACTGTCCCATTTGCTTCGAATCATTCAACATCGTCTACGACGGCGTCCTCAAGTTCCCTAAGAAGAACTTCT
TCCTTCTCTGGATGGTTGAGTCTCTCAACGGTGACAGGTCCAGAAGACATGGTACTGGTAGTGATGATAACCACCAATACTGCAAT
AACAATCTGATTGCAAGGCCTGTTGGGAGGGGCCAACCAAGCAGCAGCAGCAGCAGCAGACAGCAGTTCTCGTTCCATAAGTCGAT
TGATTTCTTCATCTCCTTCACCTCCAAGTTTCCTTTTGTGGTCGTTTTCCTTTTGATTGTCTTCTTTGCTATACCTGGCAGCCTCG
TCGTCCTTGCTCTTTACTTCCTCCTCACCATTCTTCTAGCGGTTCCTTCTGGTTTGGTCCTCTATTTTGCCTACCCTATTCTTGAA
AGGTTGGTTCATGAAATAACTTCATGAGAAACTTTTTTGATTTTGTTATTGATTGCAAGCTTGGGAATTGTAATTTGTGGTTTTTG
AGTTTTTTTAAATTACTGTTATATGAGCAACTTTGGTTTTGCAGATTTGTGACTTATTAATTGA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002888715 hypothetical protein ARALYDRAFT_476060 [Arabidopsis lyrata subsp. lyrata]3604e-032
NP_564959 RING/U-box domain-containing protein [Arabidopsis thaliana]3514e-031
AAM65966 unknown [Arabidopsis thaliana]3514e-031
CBI22278 unnamed protein product [Vitis vinifera]3362e-029
ACU18226 unknown [Glycine max]2592e-020

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q8L9H5 Putative uncharacterized protein3513e-031
Q9C546 At1g69330/F10D13.33513e-031
C6T8S4 Putative uncharacterized protein2591e-020
B9HXL6 Predicted protein2492e-019
Q84JZ7 At3g292702205e-016

Arabidopsis top hits (Blast detail)Scoree value
AT1G69330.1 zinc finger (C3HC4-type RING finger) family protein3512e-033
AT3G29270.1 ubiquitin-protein ligase2212e-018
AT3G29270.2 ubiquitin-protein ligase2212e-018
AT1G74370.1 zinc finger (C3HC4-type RING finger) family protein1746e-013

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  100%

Unigene MembersMember information