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Information for unigene UN40457
| FASTA Sequence |
| Unigene ID: UN40457 | Length: 539 |
SSR | | GGAATATAAACTTGATCCTTGCTAACCATCCTCAGTGACTTAAAAAGAACGAGTGAAATTAAACATGAAGATAACTGTCTCCATAT
TCTTTGTTGCCTCACTTCTTCTTATCACTTCATCCCTTGCTTCGCTAACGATCTCAGGTGGTGGTGGTGGTACTGGTGCGGTAGCT
CCAGCGCCGGAGATCAAAGATGGTGCAGAGTTAGAGAAATGGTGTGGAGGGAAGTGTGAAGTGAGATGCGAAGAAGCAGGTATGAA
GTATAGATGTTTGAAGTATTGTGGGATATGCTGCAAAGAGTGTAAGTGTGTTCCTTCAGGAACTTACGGGAATAAGCACGAGTGTG
CTTGCTATCATGACAAGCTCAGCAGCAAAAAGACTCCCAAGTGTCCTTGATTATACATCTCGACCTCCATCCAAATTTAAAAAAAT
AAAAAAGAAAGATCCGGTGAACAATATATGGATCTTTTATGAGTTTTTTCTTCAATTGTCCTTTGTAATTCCCGATGTTTTTTTTT
AATGACAAGTGATTCCCGGTGTT
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_179096 gibberellin-regulated protein [Arabidopsis thaliana] | 454 | 1e-043 |
| XP_002883868 gibberellin-regulated family protein [Arabidopsis lyrata subsp. lyrata] | 444 | 2e-042 |
| XP_002285141 PREDICTED: hypothetical protein [Vitis vinifera] | 280 | 2e-023 |
| XP_002510126 GAST1 protein precursor, putative [Ricinus communis] | 276 | 6e-023 |
| XP_002313889 predicted protein [Populus trichocarpa] | 273 | 1e-022 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q948Z4 Snakin-1 | 267 | 4e-023 |
| P27057 Protein GAST1 | 176 | 1e-012 |
| P46690 Gibberellin-regulated protein 4 | 166 | 2e-011 |
| P47926 Protein RSI-1 | 162 | 6e-011 |
| P46689 Gibberellin-regulated protein 1 | 151 | 1e-009 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| O82328 Putative gibberellin-regulated protein | 454 | 1e-043 |
| B9R733 GAST1 protein, putative | 276 | 5e-023 |
| B9HS89 Predicted protein | 273 | 1e-022 |
| C6T4L4 Putative uncharacterized protein | 273 | 1e-022 |
| B9MVY8 Predicted protein | 272 | 1e-022 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G14900.1 gibberellin-regulated family protein | 460 | 2e-046 |
| AT5G59845.1 gibberellin-regulated family protein | 245 | 1e-021 |
| AT2G39540.1 gibberellin-regulated family protein | 236 | 2e-020 |
| AT1G10588.1 Encodes a Gibberellin-regulated GASA/GAST/Snakin family protein | 214 | 6e-018 |
| AT1G10588.2 Encodes a Gibberellin-regulated GASA/GAST/Snakin family protein | 214 | 6e-018 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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