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Information for unigene UN40501

FASTA Sequence
Unigene ID: UN40501Length: 1056 SSR 
CTAATTTTAGAAATTTGTTATCGTCACTCCAAAAAAAGGGGGCAGAGTCATGACATAGAAAGAAGAATCCAAACACACTTATGAGA
TGGAAGATAAGATAAATGAGACACTGAGGGATGATCATAGTCTCTTCAAGCTCTTCTTTCTGGCATCTACCTTCTTCTTGTCTGCT
TGAACCTTTGCCAAACCGGCTTCTCTTTTCTGTGTCGTCGTAGTTGCAGATCCTGCTGCCGCAACAGGAACGTTGTTAGCCACTTG
TTGTTGTTGTTGGTCTTGGGCAGTCGCTGTTGTTACTCTACTGATGTCCGCCACTGAAGAGGGTGGTGGTATTGCACCAGGAGGCG
TCTCGTTGTTGGTGGTCTGGCCGCCAACATTTAGAGCCGTTGTTGACTCTGAGATAGCTCCTGTCTTGAACTTGGGTTTTGGTTTA
CCATGGATACCCGTGTAAAGCCGAGCATGCCTAGCATACTCTTCATAGTTCTCAAGTAGCATCTTTCCAGCCTGTTCGTTTAATGC
AGATTCTGGAAATGGCTCGATTAGTAAGCACCTCACAACAGAGAGAACATGTCTTAAGCCAAGACTAGGGTTCCAATCTTTTTTAA
GCGTGTTAACGCAGATCTCTCCATTAGAAGCAACATTGGGATGGAATATCTTTGTCATGAAGTAGCCTTTAGGAGGAGAATGTGGA
AAATCATGAGACAATGCCAACTTCATACGGAAAAGTCCATTCTCATAAGGAGTTCCAACTGGTCCTTCAATATCAGCAGATATTTG
TGAGAAGTCCTCGTCATTGACGAGGACCTTGATGCCATCAGGAGGAGACTCGTCAAGACTCTTGAGTTCCTTGGCGAGCTGCTTGA
TAACATTGGGAGGTAGATTCTCATTACTAGCCATGGAGAATAATAATAGTGCAAAAGGACCCTTTCTCCTCAAACAGGCAGACAAA
CACTCCCCAATGTGATGAGGTCTTCAAGACTCAAACGCAATCAAACTCTATGCAGAGTGAGAAAAGGCGATCCCTTTCTCTCTACG
GAGTAATCTCAAAGTTGAAATCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002873191 ubiquitin-conjugating enzyme 18 [Arabidopsis lyrata subsp. lyrata]11259e-121
NP_568148 ubiquitin-conjugating enzyme E2 22 [Arabidopsis thaliana]11123e-119
ACU22933 unknown [Glycine max]9717e-103
CBI32855 unnamed protein product [Vitis vinifera]9636e-102
XP_002523681 ubiquitin-conjugating enzyme e2S, putative [Ricinus communis]9582e-101

Swiss-Prot top hits (Blast detail)Scoree value
Q9FF66 Ubiquitin-conjugating enzyme E2 2211121e-120
C1C3R6 Ubiquitin-conjugating enzyme E2 S5582e-056
Q28F89 Ubiquitin-conjugating enzyme E2 S5573e-056
B4JKB7 Ubiquitin-conjugating enzyme E2 S5564e-056
B4MA02 Ubiquitin-conjugating enzyme E2 S5555e-056

TrEMBL top hits (Blast detail)Scoree value
C6TJ43 Ubiquitin carrier protein9715e-103
B9SCG2 Ubiquitin carrier protein9582e-101
A9PD43 Ubiquitin carrier protein9563e-101
C6TKF1 Ubiquitin carrier protein (Fragment)8774e-092
C5Z7A3 Ubiquitin carrier protein8765e-092

Arabidopsis top hits (Blast detail)Scoree value
AT5G05080.1 UBC22 (ubiquitin-conjugating enzyme 22); ubiquitin-protein ligase11173e-122
AT5G05080.2 UBC22 (ubiquitin-conjugating enzyme 22); ubiquitin-protein ligase11173e-122
AT2G02760.1 ATUBC2 (UBIQUITING-CONJUGATING ENZYME 2); ubiquitin-protein ligase2661e-023
AT1G14400.1 UBC1 (UBIQUITIN CARRIER PROTEIN 1); ubiquitin-protein ligase2652e-023
AT1G14400.2 UBC1 (UBIQUITIN CARRIER PROTEIN 1); ubiquitin-protein ligase2652e-023

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
93  100%

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