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Information for unigene UN40509
| FASTA Sequence |
| Unigene ID: UN40509 | Length: 1160 |
SSR | | CGCATTAAGAAAATCTTCTCCACTTTCTCTTCTTCGATCTCTCTCATCATGTCTGGTTACCCTCCTTCCAGCCAAGGCTACGGTTA
CGGCGGCAATCCACCACCACCGCAACAACAACCCTACGGATCCTCCAACACCAATCCTCCGCCCTACGGATCCTCAGCCTCCTCAC
CCTACGCCGTCCCCTACGGCTCTCAGCCTCCACCTTCCTCCGCTCCTTACGGCGCACCGCCGCCGTCTGCGCCGTACGCGGGAGAT
CACAAGCCCCACAAAGAAAAACCTCAGGCCGCCTACGGATCTCCCGGCGGCTACGGATCGTCGCCCGGTGGTTACGGTGGCTACGG
AGCTCCTCCTCCGTCGGGACATGGAGGATACGGAGCTCCTCCTCCTCCTCAGCAGGGTGCGTACGGGAGTCCGTTCGCGTCTCTGC
TACCGTCGGCGTTTCCTCCGGGAACGGATCCGAACGTCGTGACTTGCTTCCAGGCGGCGGATCGGGACAACAGCGGCTTCATCGAC
GATAAGGAGCTTCAGGGGGCGCTCTCTTCGTATAATCAGAGCTTCAGCATGAGAACTGTTCATCTCCTCATGTATCTCTTCACCAA
CAGCAACGTCAGGAAGATCGGACCGAAAGAGTTTACTTCACTTTTCTACAGTCTTCAGAGTTGGAGGACAATATTCGAGAGGTTTG
ATAAGGACAGAAGTGGGAGAATCGATACAAACGAGCTGAGAGATGCACTCTTGAGCCTCGGGTTTTCAGTGTCTCCTGTGGTTTTG
GATCTGCTCGTTTCTAAGTTTGATAAAAGTGGAGGCAGGAACAGGGCTATTGAATATGACAACTTCATCGAGTGTTGTTTGACTGT
AAAGGGGCTGACTGAGAAGTTTAAGGAGAAGGATACGGCGTTATCAGGATCAGCTACTTTCAACTACGAGGCCTTCATGCTCACTG
TTCTACCATTCCTCGTCGCTTAAGTTCGTTGCCCTTATGGAGCTTTTGGAATAATTTGTTTGTAGTTGAATTCTCTGGAGTTTTCC
TCTTTTACCTCTCTTATCGTCTTATCGACTTTGCTTTTGTAAGACTTGGAAGTGGCTCTCTCTGTATGAGCATTTAAACAAGTGTT
GTGGGATAAATTTGACTCTTAAAAATGGACTAGAATCATTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002882659 hypothetical protein ARALYDRAFT_897206 [Arabidopsis lyrata subsp. lyrata] | 1255 | 9e-136 |
| NP_187641 putative calcium-binding protein CML49 [Arabidopsis thaliana] | 1097 | 2e-117 |
| NP_001065711 Os11g0140600 [Oryza sativa Japonica Group] | 1049 | 7e-112 |
| XP_002450240 hypothetical protein SORBIDRAFT_05g002410 [Sorghum bicolor] | 1048 | 9e-112 |
| NP_001066106 Os12g0137100 [Oryza sativa Japonica Group] | 1027 | 3e-109 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8W4L0 Probable calcium-binding protein CML49 | 1097 | 8e-119 |
| Q9FYE4 Probable calcium-binding protein CML50 | 1021 | 5e-110 |
| Q6DC93 Peflin | 400 | 5e-038 |
| Q9UBV8 Peflin | 398 | 9e-038 |
| Q9ZQH1 Probable calcium-binding protein CML48 | 389 | 1e-036 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q2RAR8 EF hand family protein, expressed | 1049 | 5e-112 |
| C5Y461 Putative uncharacterized protein Sb05g002410 | 1048 | 6e-112 |
| A2ZHW9 Putative uncharacterized protein | 1027 | 2e-109 |
| Q2QY10 EF hand family protein, expressed | 1027 | 2e-109 |
| B6SNX9 Grancalcin | 1020 | 1e-108 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G10300.3 calcium-binding EF hand family protein | 1098 | 6e-120 |
| AT5G04170.1 calcium-binding EF hand family protein | 1022 | 4e-111 |
| AT3G10300.2 calcium-binding EF hand family protein | 904 | 2e-097 |
| AT3G10300.4 calcium-binding EF hand family protein | 904 | 2e-097 |
| AT3G10300.1 calcium-binding EF hand family protein | 541 | 2e-055 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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