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Information for unigene UN40512
| FASTA Sequence |
| Unigene ID: UN40512 | Length: 1044 |
SSR | | GGGATCTCTTTTCTCTCAGACACACACACACACACACACACACCTTCTTCATCATGGGAAGGTCTCCATGTTGCGAGAAAGCCCAC
ACAAACAAAGGAGCTTGGACCAAAGAAGAAGACCAACGTCTCATCGATTACATCTGTCGTCACGGCGAAGGTTGCTGGCGTTCACT
CCCTAAATCCGCAGGATTGTTACGATGTGGTAAGAGTTGTAGATTGAGATGGATTAATTACCTTCGTCCGGATCTCAAACGTGGAA
ATTTTTCTGATGAAGAAGACCAAGTCATCATCAAGCTACATAGCTTACTCGGCAACAAATGGTCATTGATCGCTGGAAGATTACCA
GGAAGAACAGATAATGAAATAAAAAATTATTGGAACACTCATATTAAGAGGAAGCTTCTCAGCCACGGAATCGACCCACAAACTCA
TCGTCCGGTTAAAGATAACGTCGCCGTGACTGATGCGAAAACGGCGTCGTCGCAATTATCAACCACTGTTATTGTTTCACCTCAAA
ACGATGCCGTTGAATACGCTTTTATAGTCAAACCGAAGACGGAAAATTCCTCCGATAACGGCGCGTCCACAAGCAGCACGACAACG
GACGAGGATCTCCGACAAAACGGAGATAGTTATTACAGAGATCATTCAGGAGATATGGAGCTGAATCTTGACCTAACTCTCGGGTC
CGGGTCCGGGTCCGGGTCGACTTCTTGGGTCGGATTTAAGCCGTGGCGGGATACGGCGATGGCGGCGCGTTTGTCACTTTAGTAAG
AATTACGAAACGGCAAAAATCTCCCAAAAATGGGATTTTTTTAGATTTTTCTTCTTGTGTGGGTCCTTTTTGAATATCTATAGACA
TTGTTTTACTTCAGTTCTTGGCATTTTGTTTTGGTTCTGTTACATGTTATTATTACCTGTTGAAGTACACAATATTAATTTTTACG
ACATATATTATTTTACCGTTGTGGTAATTTTTTTTACATTCTGTCTTAAATCTTTACTAGTTACCGGTCGATCAATTTATAAAATT
CAAGTTAACAGC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_192684 transcription repressor MYB6 [Arabidopsis thaliana] | 974 | 3e-103 |
| XP_002872444 ATMYB6 [Arabidopsis lyrata subsp. lyrata] | 964 | 4e-102 |
| XP_002534486 r2r3-myb transcription factor, putative [Ricinus communis] | 692 | 2e-070 |
| AAS19475 MYB1 [Tradescantia fluminensis] | 690 | 3e-070 |
| AEI83425 transcription factor R2R3-MYB1 [Camellia sinensis] | 690 | 3e-070 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q38851 Transcription repressor MYB6 | 974 | 1e-104 |
| P81395 Myb-related protein 330 | 694 | 4e-072 |
| Q9SZP1 Transcription repressor MYB4 | 671 | 2e-069 |
| P81393 Myb-related protein 308 | 667 | 5e-069 |
| Q9S9K9 Transcription factor MYB3 | 653 | 2e-067 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B1N7Z6 MYB8 | 717 | 1e-073 |
| B9T8B7 R2r3-myb transcription factor, putative | 692 | 1e-070 |
| Q6SL50 MYB1 | 690 | 2e-070 |
| B9IQH2 Predicted protein | 688 | 3e-070 |
| C5XRB4 Putative uncharacterized protein Sb03g041360 | 688 | 3e-070 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G09460.1 ATMYB6; DNA binding / transcription factor | 978 | 4e-106 |
| AT4G38620.1 MYB4; DNA binding / transcription factor | 671 | 2e-070 |
| AT1G22640.1 MYB3 (MYB DOMAIN PROTEIN 3); DNA binding / transcription factor | 653 | 2e-068 |
| AT2G16720.1 MYB7 (MYB DOMAIN PROTEIN 7); DNA binding / transcription factor | 638 | 1e-066 |
| AT4G34990.1 AtMYB32 (myb domain protein 32); DNA binding / transcription factor | 634 | 3e-066 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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