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Information for unigene UN40534

FASTA Sequence
Unigene ID: UN40534Length: 1412 SSR 
GAACAGGGGAAAGTCACTGTCACAGGAAATGGTCACACAATGCAATTGACTCCTCAGCAGATTCAACAATTGATGATGATGAAGGC
TGCTCACGGTGGTGGAGGTGGCGGGAAGGATATGAAGATGATGATGCCTCCTGTGGCATCTAAGGATCAGAAGAAGTCTGTTAAGT
TTGAGGAAGAGGAGGATGACGATGAGTTTAGTGATGATGATGATTATGATGATGATGATGATGAGTTCAGTGGAGATGATTATGAT
GATGATGAGTTCGACGAGGATGATGAAGATGATGGTGATGATGATGATGAATTGGGAGGACATGGTCATGGAGGTGGAGGAGGAGG
TAATCATCACATCCCTCCTAACAAGATGCCTCAAATGGGTGGTGGAGCTAAGGGACCTAATGAGATTATGACGATGATGAATGGTC
TCAAAGCCGGTGGTGGTTGCGGTGGCGGAGGAGGTGGGTTTGAGATTCCGGTGAAAATGAAGGGAATGGATGAGGGTAAAATGGGA
AAAGAGGGCAAGAAAGAAGGGAAAGAGAGTGAAGGAGGTGAGGGTAAAAAGGGAAAAGCAGATGCCAAAAGTGGTGGTGGCCTTCT
AGGATTTTTCAAAAAGGGTAAAAGTGAAAAGGGAGGTGAGAAGAAGGGAGGTGGTAAGAAAGAAGACGGTGGAGGTGATAAGGTGA
AGGCCTCCGGTGGTGGGGAAGGAGATAATGGGCCTAAAAAGGGAGGAGGTAAGTCGAAAGGAGGAGCCCATGGGGCCCATGATATC
GATGAGATCATGAAACATGTCAAAGCAGGTGGAGGAGGTAACAAGGTGAAGGGGATGGGTGGCCCAATTGGTCAAGGAGGTCCTAT
GGGTATGATGGCTCCAATGGGACACCAAGGCGGTGGGGCATTCCCGGCGGTTCAAGGCTTACCGATGAGTGGAGGCGGAGGATATT
ATCCACCGCCGTCTCAGGCAATGAACCAACAACAGTATATGCAAATGATGATGCAACAACAACATCAACAACAACAGGCTGCATTT
CATGGGGGATATGGTGGTGGTGGTCATGGTGGAGACATGTACCATCCAATGATGTATGCTCGACCTTATCCGGCAGTGAATTATGC
TCATCCACCTCCAATGCCGCCTCCACACTCAGGTCGTTATACTGATGTGTTCAGCGATGAGAATCCAGCTGGTTGTAGTATCATGT
GATCTTTTGATAATGGTAATTATAAAACGAATATGAATATGTTTGTCTAAGAAGTCTTATGTTTTTTTCTGGGGCTGTCTTTTTCT
TTTGTGAACTCAATCGAGGAATGGCAACAATATGTGCTTTAATTTGGTTAGTGGGAATGATGTTTATAATATCTCTATTTCTGAAA
AGATATGGTTACAAAATAAGATATTCGTTCAGTTAC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002882404 hypothetical protein ARALYDRAFT_896593 [Arabidopsis lyrata subsp. lyrata]6313e-063
NP_187173 heavy-metal-associated domain-containing protein [Arabidopsis thaliana]6108e-061
NP_974226 heavy-metal-associated domain-containing protein [Arabidopsis thaliana]6108e-061
AAF27028 unknown protein [Arabidopsis thaliana]6108e-061
XP_644032 hypothetical protein DDB_G0274557 [Dictyostelium discoideum AX4]2424e-018

Swiss-Prot top hits (Blast detail)Scoree value
Q8MP30 Uncharacterized histidine-rich protein DDB_G02745572421e-019

TrEMBL top hits (Blast detail)Scoree value
Q0WV37 Putative uncharacterized protein At3g0522014109e-154
Q3E7M7 Uncharacterized protein At3g05220.26105e-061
Q9MA97 T12H1.19 protein6105e-061
Q4TES1 Chromosome undetermined SCAF5157, whole genome shotgun sequence. (Fragment)2127e-015

Arabidopsis top hits (Blast detail)Scoree value
AT3G05220.1 heavy-metal-associated domain-containing protein14114e-156
AT3G05220.2 heavy-metal-associated domain-containing protein14114e-156
AT2G05580.1 unknown protein2171e-017
AT5G63740.1 zinc finger protein-related1668e-012
AT1G48400.1 F-box family protein1552e-010

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
111  20%
 
122  40%
 
82  40%

Unigene MembersMember information