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Information for unigene UN40569

FASTA Sequence
Unigene ID: UN40569Length: 781 SSR 
GGGAGTAGAAGATATAATTTGAATTGAACACAGTGATACCAGCTCTCATAAAACTAGAAACAAAGTTCAAAGCTAAATCCAAAGTT
ATCATGAGGAGTCGAAGTATGAGATGTGAATTAAATCCCAGTTAACAACATAAAAGGGGGGAAAACATAGAAATAGAGTAAAACAA
TTCTTCTCCCTAACACTAGTAGAGCTAACACATAAGAAGAGAAGAAACTCCATTAAACAAACAGCTGCTGATCCACCTCTTAGTCA
TCATCTTCCTCCTCATCACTAGCAGCATCATTCTCATCGTTGACTTCAGACTTGGACTTGTCAGAGTCATCATCTCCAGCTGTACT
GGTTCCATTAGCCAATTTCATGTTGTATTTTTGCATAGTCTTGGCGTATTCAGTCTTTTGGTCTCAGCCTTTTCTACATAAGGAGC
TTTATCATCAGCAGTCATGGATTTCCATTTGGCTCCAGCAGCTTTACCAACAGCTCCAACGGATTTGTTGTTAGGGTTAGCTAGAT
TGAACTCCTTCCGGAATCCCTCCAGGAAGACGAAGAAAGCACTTGGCGGCCTCTTTGGCTTGTTTGGATCTTTCACTTTCTTCCCC
GCTTTCTTCCCTCTCGTTTTCAATCTCTCGTCGGTGCTCTTCGCTTGAGCCTTGGTTTCACCACCTTTCATCTCTCGAGATCTGTG
AACGAACGAACGAACGAACGAACGTTAGGGTTTTCTTTTTTTCCTTCTTTTTGTTTTTGACGACGATTCAGATCTTTTTCTCCGCT
TCTTTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_179347 high mobility group B4 protein [Arabidopsis thaliana]3909e-036
NP_001077909 high mobility group B4 protein [Arabidopsis thaliana]3909e-036
CAA74403 HMG protein [Arabidopsis thaliana]3891e-035
XP_002886121 hypothetical protein ARALYDRAFT_480649 [Arabidopsis lyrata subsp. lyrata]3891e-035
AAM64404 putative HMG protein [Arabidopsis thaliana]3882e-035

Swiss-Prot top hits (Blast detail)Scoree value
P40619 HMG1/2-like protein2713e-023
P27347 DNA-binding protein MNB1B2686e-023
P26585 HMG1/2-like protein2571e-021
P40620 HMG1/2-like protein2524e-021
P40621 HMG1/2-like protein2444e-020

TrEMBL top hits (Blast detail)Scoree value
B9DG70 AT2G17560 protein3907e-036
Q42344 HMG1-like protein3907e-036
O49598 HMG protein3899e-036
Q8LCY0 Putative HMG protein3881e-035
Q94K96 Putative HMG protein3862e-035

Arabidopsis top hits (Blast detail)Scoree value
AT2G17560.1 HMGB4 (HIGH MOBILITY GROUP B 4); DNA binding / chromatin binding / structural constituent of chromatin / transcription factor3904e-038
AT2G17560.2 HMGB4 (HIGH MOBILITY GROUP B 4); DNA binding / chromatin binding / structural constituent of chromatin / transcription factor3904e-038
AT2G17560.3 HMGB4 (HIGH MOBILITY GROUP B 4); DNA binding / chromatin binding / structural constituent of chromatin / transcription factor3904e-038
AT4G35570.1 HMGB5 (HIGH MOBILITY GROUP B 5); DNA binding / chromatin binding / structural constituent of chromatin / transcription factor3421e-032
AT1G20696.2 HMGB3 (HIGH MOBILITY GROUP B 3); DNA binding / chromatin binding / structural constituent of chromatin / transcription factor2821e-025

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
123  100%

Unigene MembersMember information