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Information for unigene UN40577

FASTA Sequence
Unigene ID: UN40577Length: 1346 SSR 
TCGATTTGGGGGTTTTCTTTTCTTCTAGATCCTAGCTAATTCGTCTAAAGACGTCGCCTTTTGACGACGACGACGACGACGACGAC
CCTTTCTCTCTATTTCCTCCGCCTTCCTCCCACGCACAACAAATCTCTCCCTCAGATATGCCTTCCAATACGGCGTCGTCTAGCTC
CGCCCCCGCCGGATCTGCAGATTCTTCCTCCTCCCGTACAAAATCCAAACGACCCAAGTATTCGAAGTTTACACAGCAGGAGCTCC
CTGCTTGCAAGCCGATTCTCACGCCTGGTTGGGTGATTCTGACTTTTTTAGTCATTAGTGTGATCTTCATTCCACTCGGAGTTGTT
TCGCTTTTCGCTTCCCAGGATGTTGTCGAGATCGTTGATCGGTATGATAATGATTGCGTACCGACGCCTGCTAGGGCTAACAAGGT
TGCTTATATTCAAGGAGGTGCAGACAAATCTTGTAACCGGACACTAGTGGTTCCTAAGAAGATGAAGCAGCCTATCTACGTTTATT
ACCAGCTTGAGAACTTTTACCAGAATCACCGCAGGTATGTGAAAAGCAGGAGTGATGCGCAATTGAGAAGTGTAAAAGATGAGAAC
CAAATCGATGCTTGCAAGCCTGAGGATGATGCTAATGGGCGGCCGATTGTGCCGTGTGGTCTGATTGCTTGGAGTCTCTTTAATGA
CACATACGCTTTATCCAAAAACAACCAGCCTTTGAATGTAAGCAAGAGAGGCATTGCGTGGAAGAGTGATAGGGAACACAAGTTTG
GCAAAAATGTGTTTCCCAAGAACTTTCAGACGGGCAATCTCACCGGTGGTGGCAAGCTAGATGAAAATAAATCGCTGAGTGAGCAA
GAGGATCTGATTGTGTGGATGAGAACCGCAGCTTTGCCAACGTTTAGAAAACTATACGGGAAGATTGAGAGTGACCTGGAGAAAGG
TGATACCATACACGTGATTCTGAAGAACAACTACAACACATACAGTTTCGATGGAAAGAAGAAGCTTGTTTTGTCTACAACTAGTT
GGCTCGGTGGAAAGAATGACTTCCTCGGCATTGCTTACCTCACGGTTGGAGGAATCTGCTTCTTCTTGGCACTTGTATTCACCATC
ATGTATCTTGTGAAACCAAGGCGACTTGGAGATCCTACTTACTTATCCTGGAACAGAGTTCCCGGTGGTGGTCGGTAAACAAAGAC
TCTTTATGTAAATCTCTTTTATCCATGATTGTAATTTTTAGCCAAAACTGCGAGTGATAGTTTGTATTTATAGATGTGTAAGTGCA
TGATGATGATGTTACAGTTGAAAGATGCCCACCATGGTTGATGCTTCCTATCAAAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_566435 ALA-interacting subunit 1 [Arabidopsis thaliana]15892e-174
XP_002882787 LEM3 (ligand-effect modulator 3) family protein [Arabidopsis lyrata subsp. lyrata]15892e-174
NP_564656 ALA-interacting subunit 3 [Arabidopsis thaliana]15507e-170
XP_002894565 LEM3 (ligand-effect modulator 3) family protein [Arabidopsis lyrata subsp. lyrata]15499e-170
XP_002265244 PREDICTED: hypothetical protein [Vitis vinifera]14038e-153

Swiss-Prot top hits (Blast detail)Scoree value
Q9LTW0 ALA-interacting subunit 115899e-176
Q9SLK2 ALA-interacting subunit 315503e-171
Q8L8W0 ALA-interacting subunit 513792e-151
Q9SA35 Putative ALA-interacting subunit 411247e-122
Q67YS6 Putative ALA-interacting subunit 210011e-107

TrEMBL top hits (Blast detail)Scoree value
B9RRQ2 Putative uncharacterized protein13946e-152
B9HYB5 Predicted protein12961e-140
C6T8B4 Putative uncharacterized protein12952e-140
B9HI35 Predicted protein12612e-136
Q6H511 LEM3 (Ligand-effect modulator 3)-like12593e-136

Arabidopsis top hits (Blast detail)Scoree value
AT3G12740.1 ALIS1 (ALA-INTERACTING SUBUNIT 1); phospholipid transporter15898e-177
AT1G54320.1 LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein15503e-172
AT1G79450.1 ALIS5 (ALA-Interacting Subunit 5)13792e-152
AT1G16360.1 LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein13138e-145
AT1G79450.2 ALIS5 (ALA-Interacting Subunit 5)11273e-123

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
213  60%
 
102  40%

Unigene MembersMember information