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Information for unigene UN40587

FASTA Sequence
Unigene ID: UN40587Length: 1012 SSR 
TTTTTTTTTGGGCAACACCCTTGATTTTCCTATTTTACGAGTTGGACTTGGAAAGAGGAGAGAAGGAATCGAAACCGGGGCTCCGT
TAGCGAAAAGGTATAATAGCTGAATGTCTATCGGTTCTCTTCCCCAGAGAGAGAGAGAGAGAGAGAGAGACTGTAAACCCTAATCA
TCACCAATTCGAATAGATGGAACAGTATCCTTATCAAAATCCGTTCGAAAGACGCCCAATCGTGAAATCCAAGGCTCCTGCTGTTA
AGTGGATCAAGGAGTGGGTTCCACAAGATATTGTTGCTACAGGTGGGAAGTGTTATCTTCACAAATGGGTCACAGAGGAAACGGTG
AAGAGACTGAAAGAAACAGAGAAAGAGCCTACTACTGATGTTCCAGACCCTGAGCCCGAACCTACTTCTGAGATTCTGTTTCTATG
CAGTTACGAGGGTTGTGGAAAGATGTTCTTTGATGTTAGTGCCTTGCGCAAGCATTCCCACATCCATGGTGAAAGGCAGTATGTTT
GTGATTACCCTGGTTGTGACAAGAAATTTCTTGATAGTTCAAAGTTGAAGAGACACTGGCTCATTCATACTGGGGCTAGGGACTTT
GTTTGCACTTATGAAGGCTGTGGAAAGGCATTCTCCTTGGATTTTAACCTCAGATCTCACATGAAGACTCATTCACAAGAAAACTA
TCACATCTGTCCCTACTCTGGGTGTGGAAAGAGATATGCTCATGAATACAAGCTTAAGAACCATGTTGCTGCCTACCATGAAAAGG
TTTTTCATATTCTTTTCCTTCAAATATGTGTGTGCCTTGTGCGAAGATAGAGCCTTCCTTAGCCTGAATATCTATCAGAATAGGTT
TAGTTTCTCTTTCCTGGAGGTGGGCTGTTAGCTAATGTTATTAAGGCTTTAGTGATCTCACTGGAAGGAAGCATGTTACTGCTATG
CTATTGCTATCTTTATTTCTAGTGCATATAACTCTAATTGATGCTATGCTACGTGATTTCAGTTAC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ADK63417 C2H2 type zinc finger protein [Brassica rapa]10622e-113
XP_002874477 zinc finger family protein [Arabidopsis lyrata subsp. lyrata]9635e-102
NP_849323 uncharacterized zinc finger protein [Arabidopsis thaliana]9601e-101
CBI29733 unnamed protein product [Vitis vinifera]8651e-090
XP_002265428 PREDICTED: hypothetical protein [Vitis vinifera]8651e-090

Swiss-Prot top hits (Blast detail)Scoree value
Q2V3L3 Uncharacterized zinc finger protein At4g066349605e-103
P0C6P6 Transcription factor YY23531e-032
Q2FAY8 Transcription factor YY23531e-032
P25490 Transcriptional repressor protein YY13503e-032
Q00899 Transcriptional repressor protein YY13503e-032

TrEMBL top hits (Blast detail)Scoree value
C6TF26 Putative uncharacterized protein8641e-090
C6THB4 Putative uncharacterized protein8641e-090
B9SSP5 Nucleic acid binding protein, putative8586e-090
C6TNQ7 Putative uncharacterized protein8569e-090
B7FLN9 Putative uncharacterized protein (Fragment)8523e-089

Arabidopsis top hits (Blast detail)Scoree value
AT4G06634.1 zinc finger (C2H2 type) family protein9605e-104
AT4G06634.2 zinc finger (C2H2 type) family protein7169e-076
AT3G48430.1 REF6 (RELATIVE OF EARLY FLOWERING 6); nucleic acid binding / transcription factor/ zinc ion binding1414e-009

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
123  100%

Unigene MembersMember information