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Information for unigene UN40591
| FASTA Sequence |
| Unigene ID: UN40591 | Length: 1353 |
SSR | | GGGATTTGGAACCGACATGGCTCCTAACACTTGGGCTTTTCTCTGCCTCTTCCCAGGAATCTGAATCTCTCTCTCTCTCTCACTCC
AACCTGAACAAATCTTTCATCTTATCAACATCGAATAGTGACTTGGAATTTTGGAGATGGCTATGCAAACTGGTCAACAGATCTCT
TGGTGGAATGCTTTTGGATCTCAGCCGTTGCCTCCGTTGAGTCTTGCCGGAGATTCTGACTCGCTCGGATCTGCCGTGGAGACAGA
ACATGGTGTGGATAAACAGAGCAACTCTGCAACTCACTTAGCTTTCTCACTTGGTGATGTAAAGAGTTCAAGAGTTGTAACTAAGC
ATCATGGAGCTGCTTTCTCAACGCAACCACCTTGCTTGGAACTCGGATTTACTCAACAACAGATATATCCTTGTGTGGAACGAGAA
TACTGTGGAGTTGTTTCAGCCTATGGAACTCAGAGCAGAGTGATGCTTCCTCTAAACATGGAAACAGAGGATGGAACCATCTTTGT
GAACTCAAAGCAATACCATGCAATCATCAGGCGACGCCAGTCACGTGCAAAGGCTGCTGCTGTTCTTGACAGGAACAAACAAAGTA
GCAAAGGCCGTAAGCCATATATGCATCACTCTCGTCACCTCCATGCACTGCGCCGTCCTAGAGGATCTGGCGGAAGATTTTTGAAC
AGTAAAAGTGGAACCAGTGCAAAGAAAGCTGCTGGAACTATGCAGCCTCAGACTCAGAGTCAGACTGTGTCTCAGCATAGTAACTC
TCAGAACTCTGAAGTTCTTCATCCTGAAAGTGGGACCATGAATTTGACTACCGGACTCAATGTGTCTGGATCAGAAGTTACAAGCA
TGAACTACTTTCTAAGTTCTCCGGTCCATTCTCTTGGTGGCATGTTAATGCCTAGCAAGTGGACTGCATCAGAAGCAGCAATGGAT
AATGGCTGCTGTTATTTCAAAACCTGATCTTTTACCATTGTTTCTCAGTCAAATGGAGAAAGAGGGAGATAACTTTTTGTCTTGAA
AAAGGGCAATGAGTTTTCTTTTTCTTATTCTTCCATTAGACTGTGAACAGGCAAATCATCTTTGGCTCATTCTCTACTAAGGCTTT
TTCGCCGTCAGGTGAACGGAGCCTTGCGTTTTATCTCAGTGTGAAACTAGTTAAGAACAATGATGGGCTTTGGCAACTAAACCCAT
TTGTTCCAACTCTATCGTTTGATTTTCTGATGTTGTCTCTCTCTCTCTCATTGTGTGTGTGTGTGTGTGTGTTTGTGTTTATGTTT
CTGAAACAATTGTAAGAACTTGTAGTTGTGTGGCTTGTGTAACATATTCAAGTCCTGCTTTTG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAJ34077 unnamed protein product [Thellungiella halophila] | 1070 | 3e-114 |
| CAA74049 Transcription factor [Arabidopsis thaliana] | 1049 | 9e-112 |
| NP_187220 nuclear transcription factor Y subunit A-2 [Arabidopsis thaliana] | 1047 | 2e-111 |
| BAF00048 putative transcription factor [Arabidopsis thaliana] | 1043 | 4e-111 |
| XP_002884529 hypothetical protein ARALYDRAFT_477862 [Arabidopsis lyrata subsp. lyrata] | 1043 | 4e-111 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9M9X4 Nuclear transcription factor Y subunit A-2 | 1047 | 6e-113 |
| Q8LFU0 Nuclear transcription factor Y subunit A-10 | 638 | 2e-065 |
| Q945M9 Nuclear transcription factor Y subunit A-9 | 256 | 3e-021 |
| Q93ZH2 Nuclear transcription factor Y subunit A-3 | 246 | 5e-020 |
| Q8VY64 Nuclear transcription factor Y subunit A-4 | 246 | 5e-020 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q147N1 At3g05690 | 1047 | 1e-111 |
| Q0WS51 Putative transcription factor | 1043 | 3e-111 |
| Q3E9K5 Putative uncharacterized protein At5g06510.3 | 523 | 6e-051 |
| B9SDK4 Transcription factor, putative | 395 | 4e-036 |
| B8BN18 Putative uncharacterized protein | 290 | 6e-024 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G05690.1 NF-YA2 (NUCLEAR FACTOR Y, SUBUNIT A2); transcription factor | 1048 | 4e-114 |
| AT5G06510.1 NF-YA10 (NUCLEAR FACTOR Y, SUBUNIT A10); transcription factor | 638 | 1e-066 |
| AT5G06510.2 NF-YA10 (NUCLEAR FACTOR Y, SUBUNIT A10); transcription factor | 612 | 2e-063 |
| AT5G06510.3 NF-YA10 (NUCLEAR FACTOR Y, SUBUNIT A10); transcription factor | 523 | 3e-053 |
| AT3G20910.1 NF-YA9 (NUCLEAR FACTOR Y, SUBUNIT A9); specific transcriptional repressor/ transcription factor | 256 | 3e-022 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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