RadishBase

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Information for unigene UN40619

FASTA Sequence

Unigene ID: UN40619	Length: 936	SSR
AAAAAGGAACAAGAGAATTTTTCTTTATTACTTTTTCTGGATACATAACAATAATAAAATGGTCAGTCAAATTTCTCCCAGTCTTG AGTTACATTAGCAGAAGGAGAAGCAGGAGGAGGAGGGTTCAAGCTTCCAACACCGTTTCCGAATGTTTCCCACTCAGTGCTTACAG CCGCTGCTTTGGTTTGATCCACAAACGGGTTTGAACATCTTCCCTTCAACGTATCCACAGCCTCCTGCAACTTTTGCACTCTACGC ACCTCAGCCTTTCGCTGTACTCTAGCTTCTCCTTCTGCCTCGATACCATCCAGTTTAAGCAACTGCCTCATGAGAAGCTCAGCAGT CATGTCAAACTCCTCCACCGCAACTTTCGTCCCTCCATTAACAGAAACTTCTAAAGCAACAACCTTATCAGAGAGCTTATCGATCT CTCCAGAGACAGCTTTAACTGCAGCAATAGACTTAGCCATCTCTTGGGTCATCACTGGAGAAGGCTGCTGTTCAACTACTCTCTTA TTATTATTATTAGGTTCCTCCACAAGGACAAGCTTAGACCCATCCTTAACACCAGAAGCTTGAAGTTGCTCAGCGTCATCTTTCTC AACTCCCCTGAACAACATCTTCACATTGCTAGTAGCCTCAAATCCAATTTTCTGGACAAGGGCTTTCTTCACATCCCCGAAAGTGG CGAGGGGAGAAACGTGAAGATCGTGGTGGGATGAGCCATGGGAAGCGTTGATCCTGATGGTCTGAGCATTAACGGCGGAAGCAGAG GTGGGATCTTGGTGGAGAGGTTGTGGGTCGGAGGAGGAAGCGTCGTCTCTTCGTTGGACGAGCATACCACCAGGTCTCACTTCCCA CTCGGAATCGTCTGTTAAGTTATTATTCATCATCGTTGTCGTCGTCGTCGTCGGAGCAAAGTAGAATGGGGATTCC

Annotation (GO term)

GenBank top hits (Blast detail)	Score	e value
NP_190746 BCL-2-associated athanogene 4 [Arabidopsis thaliana]	1063	1e-113
XP_002877823 hypothetical protein ARALYDRAFT_485533 [Arabidopsis lyrata subsp. lyrata]	1063	1e-113
AAM63329 unknown [Arabidopsis thaliana]	1061	2e-113
AAC14405 unknown [Arabidopsis thaliana]	1059	3e-113
XP_002271076 PREDICTED: hypothetical protein [Vitis vinifera]	602	3e-060

Swiss-Prot top hits	Score	e value
No hits found

TrEMBL top hits (Blast detail)	Score	e value
Q8LDA0 Putative uncharacterized protein	1073	6e-115
Q8RX71 At3g51780/ORF3	1073	6e-115
O65021 Putative uncharacterized protein	1069	2e-114
B4FV61 BCL-2 binding anthanogene-1	566	4e-056
B7ZZK8 Putative uncharacterized protein	565	5e-056

Arabidopsis top hits (Blast detail)	Score	e value
AT3G51780.1 ATBAG4 (ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 4); protein binding	1077	1e-117
AT5G52060.1 ATBAG1 (ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 1); protein binding	312	6e-029
AT5G62100.2 ATBAG2 (ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 2); protein binding	308	2e-028
AT5G07220.1 ATBAG3 (ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 3); protein binding	297	3e-027
AT5G62100.1 ATBAG2 (ARABIDOPSIS THALIANA BCL-2-ASSOCIATED ATHANOGENE 2)	286	6e-026

EST library breakdown for ESTs in the assembly

Library

ESTs

Percentage of ESTs in assembly


7	2			100%

Unigene Members	Member information