RadishBase

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Information for unigene UN40623

FASTA Sequence

Unigene ID: UN40623	Length: 1394	SSR
AAGCATCTACGTATTTTTATTATCACTCCAGCAAATATGTACAGACACGTAGAAGCACTGCGAAAGCGAGATGACATACAGAAAAA GAAAGGAAAAAAAAAACAGAGACGTATTCACAACACACACACACAGAGAACAAACTCATACACGCACAAACACACAAAAGAGAACC TCTTTAGGCCTACAAACGGAAGAAACACGAACTCTGCATGCAAGGAAGGACCACTTGATGTGTCGTCTAAACGAAAGCGTGTTGGG GTGGGGCTACTCTGTTCTTTTTCTTCTTCTTTCTCTCATTTGAGTTAGAGATTAGAGATCACAGGCCGTAAGTAGGAGGAGAGTTC CTTGGTCCATTCTCTGATCCTGCTCCCTTATCGAACGCGTCCGACGTCGACCTTCTCCTAAACCGAAAGGGTTCCTTTCCTCCTGC GTTTGCTCCGTTAACATTCCCAAAGGTTCCAAGTTCGTTAGTACGAAAATTCATATATACATTCACTTCAAACCATAACATGTCTT AAAGTCCAAATACCAAATCTATGACCAAGTCTTTTAAGGGGACATGAACAGCCACGAAAATAGTATGTTACGTATATATCACAACA TTTGACAAGATATGGTTCGCATAATTCAACAAATTTAATTTTCAAAAAAAAAAAAAAAATTCAACAAATTTATCAGTCAAGGGGCA AGAATAATCAACGATATCATAGATGGAGTTCACTGTGTCACACATCTCATCTTATCAAGGAGCATGCTGCATGCATCACATAAGTC ACAGTGTCAACATGCTACTCCTCCTATCAGAGTTTTTTTTACCGTATGGACGAAACTACCCTTAAACGTAATCAGTGAGTGTACTA TTTCACCTAACCAAATTATTAACAGAAGCAAAGTGGTAACTAATAAAACTCACCAGAGAAAGGAGATACCGGTGGAGTTGAACCAG CCGGTGAAACCGGAGCTGAACCGCCTTGGTATCCTGGTGGTTTTATTATCATGATGCTGCGTGTTACCTTCACGGCATCCTCTGGT GATACTTCACCGTACGATCTCACGCTTCCACCGTCCGATTGATCTATAAGAACACCAGATCGAAGTTCAGGCCGTTGATACTATAT TTTTTCACGTTAAAGATTTATTAATTTTTATATTTTCAGTTAGAAATAATGATCAACCACCGGTTCAAGACAGCAAAAACACGGCG TACCATTGACGGAGCTAGGCCGGAAACTGAAGGTATGGTGTCTCCGAAGCTTGCCAAGGCCGTTATCTGGCCGAGGACCAGCGACG GTATCATCCCAGAGATGATCTAGTAAGCCCATGAATCAAATCAACCCTAATAGTTTTCAAGAATCTGCAAATTTTTTTGGTCGCGA GTTATGTTTCTTTCTTCC

Annotation (GO term)

GenBank top hits (Blast detail)	Score	e value
NP_849820 dormancy/auxin associated protein [Arabidopsis thaliana]	229	1e-016
NP_849819 dormancy/auxin associated protein [Arabidopsis thaliana]	229	1e-016
AAN72002 expressed protein [Arabidopsis thaliana]	229	1e-016
NP_564714 dormancy/auxin associated protein [Arabidopsis thaliana]	229	1e-016
NP_001077728 dormancy/auxin associated protein [Arabidopsis thaliana]	229	1e-016

Swiss-Prot top hits	Score	e value
No hits found

TrEMBL top hits (Blast detail)	Score	e value
A8MSC4 Uncharacterized protein At1g56220.4	229	8e-017
Q3ECN3 Putative uncharacterized protein At1g56220.2	229	8e-017
Q8H0W7 At1g56220	229	8e-017
Q8LD26 AT1G56220 protein	229	8e-017
Q9C7J7 Putative uncharacterized protein F14G9.17	229	8e-017

Arabidopsis top hits (Blast detail)	Score	e value
AT1G56220.1 dormancy/auxin associated family protein	229	4e-019
AT1G56220.2 dormancy/auxin associated family protein	229	4e-019
AT1G56220.3 dormancy/auxin associated family protein	229	4e-019
AT1G56220.4 dormancy/auxin associated family protein	229	4e-019
AT1G54070.1 dormancy/auxin associated protein-related	125	5e-007

EST library breakdown for ESTs in the assembly

Library

ESTs

Percentage of ESTs in assembly


9	4			100%

Unigene Members	Member information